Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 107 3e-19 >seq1 Length=1114666 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||||||||| ||||| ||||| ||||||||||| Sbjct 176984 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 177042 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | | ||||| || |||||| ||||||| ||| |||| ||||| | Sbjct 177043 TAGAAGATTAGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 177102 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| | |||| || | | | ||||| ||||| | |||||| || Sbjct 177103 GAGAGCTGTTCTAAAGACATTTTTGGAATCTGTTATTAGAGATGCAGTTACCTATACTGA 177162 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| || |||| |||| || || | || | || || Sbjct 177163 ACACGCAAAGAGAAAGACAGTCACTTCGCTGGACGTCGTGTACGCTCTAAAGAGACAGGG 177222 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | ||||||||||||| ||||| Sbjct 177223 TAGAACCCTTTATGGTTTTGGTGGTTAA 177250 Score = 102 bits (112), Expect = 1e-17 Identities = 185/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||||||||| ||||| ||||| ||||| ||||| Sbjct 392195 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCTGCTAT 392137 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | | ||||| || |||||| ||||||| ||| |||| ||||| | Sbjct 392136 TAGAAGATTAGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 392077 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | |||| ||| | | |||||||| |||||| | || || || Sbjct 392076 GAGAGCCGTCCTAAAGACGTTCTTAGAATCCGTTATCAGGGATGCTGTTACTTACACTGA 392017 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || || ||||| | ||||| || | || | ||||| Sbjct 392016 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTACGCTCTAAAGAGACAAGG 391957 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||||| || ||||| Sbjct 391956 TAGAACCCTTTATGGTTTCGGTGGTTAA 391929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075193599851