Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 4e-13 seq3 86.0 5e-12 >seq7 Length=1865392 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| || | |||| ||||| || ||||| || || |||||||| || | | Sbjct 634305 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 634364 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||||||| || || ||| |||| | | ||||||||| ||| Sbjct 634365 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 634424 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||||| || || | | | ||| || | ||| | Sbjct 634425 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 634484 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 634485 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| || || |||| || || || || ||||| || |||||||| || | Sbjct 634989 CCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAT 635048 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | ||||| | ||| || || ||| |||| | | ||||||||| ||| Sbjct 635049 AAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 635108 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || | | || || | | | | ||| || | ||| Sbjct 635109 ATGCCTTCTTTGTCCTGGATCTTAGAT--TTGACGTTGTCGATAGTATCAGAAGATTCCA 635166 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 635167 CTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 635215 >seq3 Length=1464093 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| ||||| |||||||| ||||||||||||| || |||| | | Sbjct 318443 CTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCA 318384 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| | || | | |||||||| || | || || ||| Sbjct 318383 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 318324 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| | || || | ||| ||| Sbjct 318323 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAATG 318264 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| || ||||||||||||||||| Sbjct 318263 GTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087965440930