Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7 158 1e-33 seq3 132 4e-26 >seq7 Length=1865392 Score = 158 bits (174), Expect = 1e-33 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| |||||| ||||||| | |||||||| || ||| Sbjct 634531 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 634472 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || |||||||| | | | || | |||| ||| ||||| ||||| ||||| ||||||| Sbjct 634471 GATACTATCGA-TAATGTTAAATCTAAAATTCAG-GACAAGGAAGGTATTCCTCCTGACC 634414 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | |||||||| || || ||||| ||||| | | | ||| || ||||||| Sbjct 634413 AACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACA 634354 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 | || || ||||| || || || || || || |||| |||||||| ||| Sbjct 634353 ACATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 634304 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | |||||||| | ||||| | |||||||| || ||| Sbjct 634987 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 634928 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| ||||| ||||| ||||| || |||||| Sbjct 634927 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 634868 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || |||||||||||||| | | | ||| || |||||||| Sbjct 634867 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 634808 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || ||||| || || || || || | || ||||||| || Sbjct 634807 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGG 634761 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || |||||| | ||||| | ||||| ||||| || Sbjct 635443 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 635384 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||| ||||| |||||||| ||||| Sbjct 635383 GACACCATCGACAACGTCAAGTCAAAGATTCAG-GACAAGGAAGGTATTCCACCCGACCA 635325 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | |||||||| || || || | ||||||| | || | |||||||| Sbjct 635324 ACAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAA 635265 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || ||||| || || || || || ||||| |||||||| || Sbjct 635264 TATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 635217 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | |||||||| ||||||| | |||||||| || ||| Sbjct 635215 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 635156 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||| |||| || | || | || ||||||||||| ||||| || || Sbjct 635155 GATACTATCGACAACGTCA---AATCTAAGATCCAG-GACAAAGAAGGCATTCCTCCAGA 635100 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | | |||||||| || || ||| | || |||| | ||| | ||||| Sbjct 635099 CCAACAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTA 635040 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || ||||| || || || || || ||||| |||||||| || Sbjct 635039 CAACATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGG 634989 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | || || || || ||| Sbjct 635671 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 635612 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| ||| ||| ||||| ||||| ||||| || |||||| Sbjct 635611 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 635552 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || || ||| | ||||| | | | ||| || |||||||| Sbjct 635551 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 635492 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || || || || | || ||||||| || Sbjct 635491 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 635445 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | || || || || ||||| || || Sbjct 528044 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGATACCATT 528103 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| |||| | ||| ||||| ||||| || |||||||||||||| | | Sbjct 528104 GACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 528162 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || || || ||||| ||||||| | | || || || ||||| || ||||| Sbjct 528163 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 528222 Query 25187 AGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | || || || ||||| | ||||| || Sbjct 528223 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 528261 >seq3 Length=1464093 Score = 132 bits (146), Expect = 4e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | || || || || ||| Sbjct 318229 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 318288 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| ||||| || ||||||||| Sbjct 318289 GACACTATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGTATCCCACCTGAC 318345 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || || ||| ||| Sbjct 318346 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 318405 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| | || || || || || | ||||| || Sbjct 318406 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 318455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327963031705