Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 seq7 96.9 4e-15 >seq6 Length=1554288 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 ||| || | || || || | ||| |||||||| ||||| | ||||||||||| | | Sbjct 894109 ACAAACGTGGGTAGTGCCACTGATGCCAGATTGCACACTGCAGTCTCATCCTTGGAACTA 894168 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 || |||| |||||| || ||||| ||| ||||||||| |||| |||||||| || Sbjct 894169 TATTCTACAATTTCACAGCATAAATTAGAAGACTTAATGGTTCCCAGATTCTTTTGGTTC 894228 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 || ||| ||||| | ||||||||| |||||| Sbjct 894229 GATTTTAAATTACAAGAATCCTTGTAAAGCATA 894261 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | || ||| |||| |||| | |||||| || ||| || Sbjct 893233 TAGTACATTCCGGTCTTCAATCCGTGCCTCCATGCATGGAAATGCATACTGGTCAATTTC 893292 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||||||| ||| |||||| ||||||| |||||| ||||||||||| || || Sbjct 893293 CCCATTGTTGGAGTTTTCATGAACAGGTTCAAACTTTGTGATTGATCGATAAATGGTGAT 893352 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGTTCTGTAG 115740 | ||| ||||||||||| | | || ||| ||| ||||| || ||||||||| Sbjct 893353 CTATCACGAGCCATATCAAT--TAGCGGTC-TCTGTGGGATCTCCCAAACCGTTCTGTAG 893409 Query 115741 A 115741 | Sbjct 893410 A 893410 >seq7 Length=1865392 Score = 96.9 bits (106), Expect = 4e-15 Identities = 288/436 (66%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| ||| ||| | ||| ||||| | |||| | |||||| ||||| | ||| Sbjct 1151048 AGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACC 1151107 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||| |||||| |||||||||||| || || ||| |||||| || |||||||| | Sbjct 1151108 TGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAAC 1151167 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCA-AAGGAGCGGGACTTTGTATCAA 127697 || ||||| || || || | || | || ||| || | || | | | | | || Sbjct 1151168 ACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCT-TGAA 1151226 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA- 127756 |||| | || ||||| | |||||||| || ||| ||| | | | | || || | | Sbjct 1151227 TCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAA 1151286 Query 127757 --AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 127814 || | ||| |||| || | |||| | |||| |||| || | | ||||| | Sbjct 1151287 ATAAAAATTC--ACTTTCCT-CGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAG 1151343 Query 127815 TTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 127873 |||| |||| ||| ||| || ||| || ||||||| | || || | Sbjct 1151344 TTTCAGAATGGATATTTTCCATCAT-AATCTGGAACCCGTAGAAGCACTTAGCCTCCGGT 1151402 Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 || || |||||| | | ||||| | | ||||||| |||||| |||||||| | Sbjct 1151403 ATTTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCT 1151462 Query 127934 GCAAAAAACGCCAGGA 127949 ||||| ||||| |||| Sbjct 1151463 GCAAAGAACGCTAGGA 1151478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507146318120