Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 131 4e-25 seq3 109 1e-18 >seq7 Length=1865392 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||| ||||| || ||||| |||| ||||| |||| | || || Sbjct 635226 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 635285 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| || || || || || | ||| ||||| || ||| ||||| Sbjct 635286 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 635345 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||||||| ||| ||| |||| |||||| | | || || || || ||| Sbjct 635346 TTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 635405 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || |||||||| Sbjct 635406 ATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTG 635440 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | ||| || |||||||||| ||||||||||| ||| || || || Sbjct 528250 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 528191 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || |||||||| | | || ||||| || || ||||| Sbjct 528190 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 528131 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| || | ||| || | | ||| || ||||| ||||| Sbjct 528130 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTATCAGAGGATTCGACCTCCAAAGTGAT 528071 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 528070 GGTCTTACCAGTCAAAGTCTTGACAAAA 528043 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || ||||| ||||| || ||||| |||| |||||| |||| || || || || Sbjct 634544 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 634603 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| || || ||||| || || ||||| || | || ||||| ||| ||| || || Sbjct 634604 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 634663 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| |||| |||||| | | || || || || ||||| Sbjct 634664 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 634723 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || || || ||||| Sbjct 634724 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTG 634756 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | || | ||| ||||| ||||| || |||| |||||| |||| || ||| || Sbjct 634314 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 634373 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||| ||||| || || || || | | ||| ||||| ||| ||| ||||| Sbjct 634374 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 634433 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || || || |||| || || | | ||| || ||||| ||| Sbjct 634434 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 634493 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || | ||||||||||| ||||| Sbjct 634494 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTG 634528 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || || ||||| |||||||| || || ||| || | ||||||||| |||||||| Sbjct 634402 ATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAA 634343 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||||||||| ||| | ||||| ||||| Sbjct 634342 GAGTCTACTCTGCACTTGGTTTTAAGACT 634314 >seq3 Length=1464093 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | || || |||||||||| ||||||||| | ||| || || || Sbjct 318444 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 318385 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 318384 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 318325 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| || |||| ||||| | | ||| || || | || || Sbjct 318324 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 318265 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||| || |||||||| || Sbjct 318264 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTG 318232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921494265469