Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 295 8e-75 seq7 288 1e-72 seq6 208 9e-49 >seq3 Length=1464093 Score = 295 bits (326), Expect = 8e-75 Identities = 1165/1834 (64%), Gaps = 57/1834 (3%) Strand=Plus/Minus Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068 || ||||| || || |||||||||||||| | ||| |||| || ||||| ||||| Sbjct 649255 TTGTGTTCTCAAGTAGTACATACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCAT 649196 Query 47069 ACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATC 47128 ||| ||||||||| | || | || || ||||| | || ||| ||||| Sbjct 649195 ACTTGTTAATTTACCCATTGTGGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATC 649136 Query 47129 AATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188 ||| || || | | |||||| ||||| |||| || | ||||| | || ||||| || Sbjct 649135 AATGAACACAGCACGATCAGCAGCCATGTCTAGAACATGTCTTTGAGAAATTTCCCACAC 649076 Query 47189 TGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGATCCTCC 47245 || || || | | ||| || |||| ||| | ||| | | || ||||| || || Sbjct 649075 CGTCTTGTACAAATCTTTGATTTCTTGTGGAATATTTGGAATGTTCTGAATGGAACCA-- 649018 Query 47246 gttttctataat--tttgttttttaattcatttga--ccaaagttttcgttc-agttaat 47300 || || |||| |||||| ||| || | ||| | ||||| | || | ||| Sbjct 649017 -TTATCAGTAATGATTTGTTGTTTCATAC-TTTCATCCCAAATACCTAAATCTACCAAAT 648960 Query 47301 gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATAT 47360 ||| | ||| | |||||||||||||| ||||| ||||||| || | ||| || Sbjct 648959 CCTTTAACAAG-TATGGATTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTAC 648901 Query 47361 ATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCT 47420 || ||| ||| || ||||| | | |||| || | || || ||||| | ||||| || Sbjct 648900 ATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCA 648841 Query 47421 GTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNN 47480 || ||||| | || |||||||| |||||||| |||| || || || Sbjct 648840 GTGGGCATAGGGGCCACTAATAATGAGTTTCTTACACCATGTTCTTTAATGCCTTGTCTC 648781 Query 47481 NNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATT 47540 ||| ||||||||| | ||||| ||| | ||||| |||| |||| | || Sbjct 648780 AATGGTTCCCAATCCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAAATTGTAAAAGA 648721 Query 47541 CCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCA 47600 |||| || || ||||| | ||| || ||||| ||||| | || || | |||| Sbjct 648720 CCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCA 648661 Query 47601 CAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT 47660 ||| | |||||| |||| | || || |||||||| |||| | ||| | | || Sbjct 648660 CAAGATTGTTCCAAGGCACCGTGGTAAATAGTTTCAAAAATTTGTTGGTTCAATATTTTT 648601 Query 47661 GCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACA 47720 || || | |||||||| || || || ||||| || || | |||| Sbjct 648600 GCCTCAGGAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACA 648541 Query 47721 CCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTG 47780 |||| |||| |||||||| | |||| || || ||||| || | ||| || | | Sbjct 648540 CCAAGTGCAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAG 648481 Query 47781 TTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTA 47840 || ||| || | || || | | | | ||| |||||| Sbjct 648480 TTACGATCAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTG 648421 Query 47841 TTAAAATCAAAC--TTGTTATTTA-----------TA-----ACA-AACCTATTAAGTGC 47881 |||| || ||||| ||| || ||| || | ||| ||| Sbjct 648420 GCAAAACTGTACCATTGTTCCTTACCATCTGCTGATACTTCCACACAAGATGGTAA-TGC 648362 Query 47882 TATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCA 47939 ||||| |||| |||||| | || |||| ||| | || |||| | |||||| Sbjct 648361 GATAGAAGCTAAATTACAAGCTGCAGTTTCATCCTTG--TCAGAGTATTCCACGATTTCA 648304 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999 ||||| ||| | |||| || ||| | || | || ||| | | |||||| Sbjct 648303 CAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACAT 648244 Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059 || ||||| || ||||| |||||||| |||||||| | || | ||| | || | | | Sbjct 648243 GCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATAC 648184 Query 48060 CA-AAC-----AGTCCTA---GCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT 48110 || ||| || ||| | |||| || || | ||| | || | ||||||| Sbjct 648183 CACAACTTTTGAGCTCTAATTGTCTTTCTACCACGGCCTTCTTGTTCATAACGTTCGTAC 648124 Query 48111 TTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170 || || |||||||| || ||||| |||| |||| |||||| |||| | Sbjct 648123 ---------AATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTT 648073 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 ||| | | | || ||| || |||| |||| || | |||| || | ||| || ||| Sbjct 648072 GGAGAGAAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATC 648013 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | ||| |||||||| || | | | |||||| || ||| ||| || | | Sbjct 648012 CATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATA 647953 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 |||| || || | ||||| | ||||||||||| ||||| | || | | | || ||| Sbjct 647952 TCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGT 647893 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 | ||||| || |||||||| | ||| | ||||| |||||| |||| | | ||||||| Sbjct 647892 CTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGG 647833 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 | | |||||| || ||||||| || || | ||| ||| || ||| | || ||| Sbjct 647832 ATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTA 647773 Query 48471 CTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529 ||| || || || |||||||| || | || || || | ||||| ||| | | Sbjct 647772 TGAATATGCAA-CCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGA 647714 Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTG 48589 ||||||||| ||||| || ||| ||| |||| | || |||||| | |||||| Sbjct 647713 ATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTG 647654 Query 48590 CGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGA 48649 ||||| ||| |||| ||| || | |||||||| ||||| || || | || ||| Sbjct 647653 TGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAATACCTCAATGA 647594 Query 48650 TAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATAC 48709 | ||| || || ||||| || |||| | ||||| ||| ||||| | | || Sbjct 647593 CATCAAATTGTAAGTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAAC 647534 Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769 | ||||| | || ||| ||||| ||| || | ||| || | || | || || Sbjct 647533 TCTCATTATTAGATGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGA 647474 Query 48770 TTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803 ||| || || || ||||| ||||| ||| || Sbjct 647473 ACGTTCTAAAGTCTTGAAACCGAAATAATTGAAT 647440 Score = 87.8 bits (96), Expect = 2e-12 Identities = 183/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 48933 GTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGA 48992 |||| || |||||||| || | || |||||||| |||| | |||| ||||| |||||| Sbjct 647283 GTTTGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGA 647224 Query 48993 ATTGTTGTACATGTACT-AGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTAC 49051 | || || |||||| | || |||| ||||| || |||||||||| ||||| || Sbjct 647223 ACAGTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAAC 647165 Query 49052 ACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCAT 49111 |||| || | || ||||| | | || || || | ||||||||| Sbjct 647164 ACCTTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGG 647105 Query 49112 ATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTC 49171 ||| | ||||| ||||| || ||| | | |||||| ||||| || | | ||| Sbjct 647104 ATCTAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGACGGGCTC 647045 Query 49172 TTTACGACCGTCACGTTTTATAACAAACAT 49201 ||||||||||| | || ||||||||| Sbjct 647044 CTTACGACCGTCTCTCTTGTAAACAAACAT 647015 >seq7 Length=1865392 Score = 288 bits (318), Expect = 1e-72 Identities = 427/604 (71%), Gaps = 5/604 (1%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| |||||||| || | || |||||||||| |||||||||||||| || ||||| Sbjct 1151045 ACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAA 1151104 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||| ||||| || || | || || ||||| || || | |||||||||||| || ||||| Sbjct 1151105 ACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAA 1151164 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 | |||||| ||||| ||||| || |||| |||||| ||||| ||| || | || Sbjct 1151165 AACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTG 1151224 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 |||||| | | |||||| || ||||| | || | ||| || | || || | ||| Sbjct 1151225 AATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATT 1151284 Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 ||||| | | || || || |||||| || || | ||| ||||||| || | Sbjct 1151285 AAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGT 1151344 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 ||| ||||| |||||||| || ||||| || ||||| || || | || || | ||| Sbjct 1151345 TTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTAT 1151404 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 || || ||| | | || | || |||||||| |||||||| || ||||| ||||| Sbjct 1151405 TTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGC 1151464 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGT----TAATGTATTCC 19435 ||| || |||| || | ||| |||| | ||||| || | | || |||||| Sbjct 1151465 AAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT-TATTCC 1151523 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 |||||| | ||| || |||||||| | ||||||| |||||||||| || || |||||| Sbjct 1151524 AATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTC 1151583 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTAT 19555 | || || | ||| || ||| |||||| || || || | |||||||||| ||||| Sbjct 1151584 TCTTGTAAGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCTACGTTTAT 1151643 Query 19556 TTTC 19559 |||| Sbjct 1151644 TTTC 1151647 >seq6 Length=1554288 Score = 208 bits (230), Expect = 9e-49 Identities = 555/830 (67%), Gaps = 42/830 (5%) Strand=Plus/Plus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTA 47934 ||||| | ||||| ||||| || || || ||||| ||||| | |||||| || | Sbjct 894121 AGTGCCACTGATGCCAGATTGCACACTGCAGTCTCATCCTTGGA--ACTATATTCTACAA 894178 Query 47935 TTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTT 47992 ||||| |||| |||| | | || || || |||| ||| | || || ||| | Sbjct 894179 TTTCACAGCATAAATTAGAAGACTTAATGGTTCCCAGATTCTTTTGGTTCGATTTTAAAT 894238 Query 47993 GTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGAT 48052 |||| | |||||||||||||||||||| || ||||| | |||| || | Sbjct 894239 --TACAAGAATCCTTGTAAAGCATAAAAGGACCGCCTGTTTCCACTTGAGCTTGCA---- 894292 Query 48053 AGATTTCCAA--ACAG-TCCTAGCCTTTATAACAGCTCTAGCTTTATTATCA------TG 48103 | || || | |||| | | | ||||| || || | || ||| || || Sbjct 894293 AAATCTCAGACCACAGCTTTTGGGCTTTA--AC-GC----GTTTCATTGGCAATGCAGTG 894345 Query 48104 --TTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGA 48161 |||||||| ||||| || ||||| || | || || |||| | || ||||| Sbjct 894346 GCTTCGTATTGTTCATATAGCTCTTCAAACTCCTTACCGTAGACATCACTTAGACCAGGC 894405 Query 48162 CATTCATTAGGACACATCAATGACCAATCCTCAT--CATTTTTTACTCTAGTCATAAATA 48219 ||||| || | | | ||||| || ||| || | | || || |||| || | Sbjct 894406 GCTTCATCTGGGCTGAAAAGAGACCACTCACCATTGCACTGTACACGCT--TCATGAACA 894463 Query 48220 TATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTAT 48279 |||||| ||||| || || | ||||||||| |||| ||||| ||| || || ||| | Sbjct 894464 AATCTGGAATCCATAGTGCAAAAAATAAATCTCTAGCTCTTAATTCATCCTTACCATGGT 894523 Query 48280 TCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338 || || |||| | || |||| || | | ||| | |||||| ||||| |||||||| | Sbjct 894524 TCTTTCTTAACTGCAGGAAA-TCAAAAACATCTGAATGCCAGGGTTCCAAATATATA--C 894580 Query 48339 ATTA--CACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAA 48396 | || |||| || || || || ||||| || || | ||||||||||||||| ||| ||| Sbjct 894581 AGTATGCACCCGGACGCTTGTTTCCTCCCTGGTCCACATATCTGGCAGTATTATTAAAAA 894640 Query 48397 CTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCAC 48456 | | || ||| || || |||||||| || ||||||| | ||| || | || |||| Sbjct 894641 CACGTAGCATGGGAACTATACCATTAGAAGTACCATTAGATCCAGACACATGGGCCCCAC 894700 Query 48457 TAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC-A 48515 | || ||||| || || |||||| || || || | | || || |||||||| Sbjct 894701 TTGCCCTTATGTTGGAAACATGAATACCAATTCCGCCCGACGCCTTGGAGATTAGAGCTG 894760 Query 48516 CACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAA 48575 | | | ||||| | | | | ||||| || ||| ||| ||| ||||| | ||||| Sbjct 894761 TATCCTCTAAGGTTTTGA-AGATTCCCTCAATAGAATCCTCTTTCATACCAACAAGAAAG 894819 Query 48576 CAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATA 48635 || ||| | | ||| || |||| || || ||||| || |||||||||||| Sbjct 894820 CAGGAAGAAAGATATTGATTCACTGTGCCTGCGTTGAACAATGTAGGGGATGCATGAATA 894879 Query 48636 AACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC 48685 || ||||| ||| | || || ||| |||||||| |||||||| ||||| Sbjct 894880 AAATATTTCCGTGACATCAGTTCATAGGTTTCAATCACAGAATCAATATC 894929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108750815480