Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 seq3 96.9 3e-15 >seq7 Length=1865392 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | || ||||| || || || |||||| || || ||||||||||| Sbjct 634305 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 634364 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | |||| ||||| |||||||| ||||| |||| || |||||| || | ||| Sbjct 634365 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 634424 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| || ||| ||| | | | || || || | ||||| Sbjct 634425 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 634484 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || ||||| ||||| ||||| || ||||| Sbjct 634485 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| ||||| || || ||| || || || || ||||||||||| Sbjct 635445 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 635504 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | |||| |||| ||||| || ||||| |||| || |||||| || | ||| Sbjct 635505 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCTGGAGGA 635564 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| || || | | | || || | || ||| Sbjct 635565 ATACCTTCCTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACC 635624 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || |||||||| || || ||||||||||| Sbjct 635625 TCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 635671 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | | ||||| || || || || || || ||||||||||||||| Sbjct 635217 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 635276 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| | || |||| ||||||||| ||||| ||||||| |||||| || | ||| Sbjct 635277 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 635336 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||||| || || | | | || || | ||| || Sbjct 635337 ATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 635396 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || | ||| || || ||||| ||||| Sbjct 635397 TCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| ||||| || || || || || ||||| ||||||||||| Sbjct 634761 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 634820 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | |||| || || || ||||| ||||| || |||| |||||| || | |||| Sbjct 634821 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 634880 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| || || | | | || || | ||||| Sbjct 634881 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 634940 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | ||| || || ||||| ||||| Sbjct 634941 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 >seq3 Length=1464093 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || | ||| || ||||| || ||||| || || | ||| | | || ||| Sbjct 318437 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCC 318378 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||| ||||| |||| || ||||| || | || | || |||||||| | Sbjct 318377 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGA 318318 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | || ||||| | ||||| || || Sbjct 318317 ATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAATGGTCTTA 318258 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||||||||| || ||||||||||||||| || Sbjct 318257 CCCGTCAAAGTCTTGACAAAAATCTGCATCCTG 318225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937567501261