Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 154 7e-33 seq6 122 4e-23 >seq3 Length=1464093 Score = 154 bits (170), Expect = 7e-33 Identities = 286/420 (68%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||| | ||| ||||||||||| || | ||||||||||| Sbjct 648031 CATGAACAAATCAGGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTT 647972 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || |||||| | | ||| | ||||||||| |||||||||||||||||||| ||||| Sbjct 647971 ACCATGGTTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATA 647912 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | || || || ||| || ||||||||||| || || | |||||| | || Sbjct 647911 AAGGGCGAATGCTCCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTT 647852 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||||| | |||||| | ||| ||| | ||| || || || | ||| | || Sbjct 647851 AAAAACACGAACCATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGA 647792 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || || | ||| | ||| ||| | || || |||||||| || ||||| Sbjct 647791 ACCCGTAGAACGAATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCAT 647732 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | || ||| |||| |||| ||| ||| ||||||| | | | Sbjct 647731 GGCACATTCTTTTAATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAG 647672 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 |||||||| | | ||| | ||| | || |||| ||| || | || || | |||||| Sbjct 647671 GAAACAAGATGCCATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATG 647612 >seq6 Length=1554288 Score = 122 bits (134), Expect = 4e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || |||||||||||||| | |||| ||||||||||||| ||||| | ||| || Sbjct 894453 CTTCATGAACAAATCTGGAATCCATAGTGCAAAAAATAAATCTCTAGCTCTTAATTCATC 894512 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || || |||||| ||| | | ||||||||||| |||||| ||||| ||||| || Sbjct 894513 CTTACCATGGTTCTTTCTTAACTGCAGGAAATCAAAAACATCTGAATGCCAGGGTTCCAA 894572 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||| ||| | ||| | || ||| || || || || ||||| ||||| | Sbjct 894573 ATATATACAGTATGCACCCGGACGCTTGTTTCCTCCCTGGTCCACATATCTGGCAGTATT 894632 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAA 26146 ||| ||||| | ||| ||||||| ||| | ||| Sbjct 894633 ATTAAAAACACGTAGCATGGGAACTATACCATTAGAA 894669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039978412525