Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 >seq5 Length=881646 Score = 127 bits (140), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 139843 AATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGT 139902 ||||||| | | | ||| ||||| || || ||||| |||||||||||| ||||| | Sbjct 642303 AATTATACGAAAGTAACATGGCCTCCGCGGCAGCAGTACCTTCATCTAATAATGATGCAT 642244 Query 139903 TTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCA 139962 | | || ||||| || || | || |||| | ||||| |||| || | || |||| Sbjct 642243 TGGATACAGGTAAACCAGTCAAATCACTGATAACTGTTTGAAAATTTAACAGAGACTCCA 642184 Query 139963 ATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCT 140022 |||| ||||||||||| || | |||||| |||||||| || || ||||| ||| ||| Sbjct 642183 ATCTGCCCTGAGATATTTCTGGTTGATATGGAGTGTATGAAGTATACCATTCGGGACTCT 642124 Query 140023 CAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 | | || |||| | || ||||| ||| ||||||||| || || || | ||| || Sbjct 642123 CTAAGACATTTCTCATAATCACTGGCGGTAAAATGGTTCCGTAATAACCCTTACCAAT 642066 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 ||| || ||||| | || ||||| || |||||||| || || ||||| || | Sbjct 642873 CAGCCACGTTTGCCAAGAGCGCTTGCGCGGTGCAGATATTGGAAGTAGCTTTATCACGCT 642814 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413 |||||||||| ||||||||||||| |||| | ||||| || || | |||| Sbjct 642813 TAATATGCTGTTCTCTAGTTTGTAACGCTAGACGCAATGCAACGTTACCCAAACGGTCCT 642754 Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGT--CTGTTGTTGCAAA 139471 ||| ||| |||||||| ||||| || ||| ||| | ||| ||| ||||| Sbjct 642753 TAGACACACCCACAATTCTACCAGGGATACGTCTATTA-AGGTGTTCCTG-AACCGCAAA 642696 Query 139472 GAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTG 139519 || |||||||||||||| ||||| || | || | ||||||||| || Sbjct 642695 AAAGGCAGCATGAGGACCACCGTAACCAAGTGGTACACCAAACCTCTG 642648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998349337640