Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7 170 3e-37 seq3 96.9 5e-15 >seq7 Length=1865392 Score = 170 bits (188), Expect = 3e-37 Identities = 363/544 (67%), Gaps = 3/544 (1%) Strand=Plus/Plus Query 18150 ATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAA 18209 |||||| ||| |||||||| ||||| |||||||| ||||| | || ||||| ||| | Sbjct 1151038 ATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGA 1151097 Query 18210 ACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAG 18269 | ||||| || ||||||| ||| | || || | |||||| || | || || | | Sbjct 1151098 AAGTTAAACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCG 1151157 Query 18270 AAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTAT 18329 | ||||| | ||| || || || || || | ||||||||||||| || | ||| Sbjct 1151158 AGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTAT 1151217 Query 18330 TGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTA 18389 | | ||||| | |||||||||| | | || || || | || | Sbjct 1151218 CGTCTTGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAA 1151277 Query 18390 TAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449 | |||||||| ||| || |||| | || |||| | | || || || || || | | Sbjct 1151278 TTGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCG 1151337 Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509 |||| |||||||||| || ||||||| ||||| || | || || | |||||| Sbjct 1151338 AATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCT 1151397 Query 18510 CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569 | || ||| | ||| | | || | || ||||||||||||||||| ||||| || | Sbjct 1151398 CCGGTATTTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGG 1151457 Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCA---TTATCCTTGAGAT 18626 | ||| || || || | || | |||||||| | ||||| | | | | || Sbjct 1151458 ATGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT 1151517 Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 | ||||| ||||| | ||| || |||| ||| | |||||| | ||||||||| |||| || Sbjct 1151518 TATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTT 1151577 Query 18687 CGGC 18690 | || Sbjct 1151578 CTGC 1151581 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || | || || || || || || || ||||| ||| |||| Sbjct 635215 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 635156 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| ||| ||| || || || ||||||||||| |||||||| ||| Sbjct 635155 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 635096 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| |||||||| || || ||| |||||||||||| ||||| || Sbjct 635095 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 635036 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || ||||| || || ||||| ||||||| ||| Sbjct 635035 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGGT 634988 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || |||||||| || |||||||| || || || ||| |||| Sbjct 635671 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 635612 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || ||||| || ||||| || |||||||| ||| Sbjct 635611 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 635552 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| || ||||| || ||||| |||||||| || ||||| || Sbjct 635551 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 635492 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || ||||| || || || ||||||||||| ||| Sbjct 635491 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGT 635444 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 635443 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 635384 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || || || ||||| || || || || ||| Sbjct 635383 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 635324 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||||| ||| ||||||||||| |||||| |||||| |||| ||||| ||| Sbjct 635323 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 635264 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || || || ||||| ||||||| ||| Sbjct 635263 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGGT 635216 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 634759 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 634700 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || ||||| || || || |||||||| ||| Sbjct 634699 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 634640 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | ||| |||||||| || || ||| |||||| | || ||||| || Sbjct 634639 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 634580 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || | || ||||||||||||| ||| Sbjct 634579 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGGT 634532 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || | || || || ||||| || | ||||| ||| |||| Sbjct 634987 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 634928 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || ||||| || ||||| || || ||||| ||| Sbjct 634927 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 634868 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | |||| ||| ||||| || | ||||| |||||| | || ||||| || Sbjct 634867 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 634808 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || || || || ||||||||||| ||| Sbjct 634807 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGT 634760 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || || || |||||| ||||||| ||| Sbjct 528044 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGATACCATT 528103 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 ||||| || || || || || || ||||| || || || || ||||||||||| Sbjct 528104 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTA 528163 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | || |||||||| | |||||| ||||| || || || || | | ||||||| Sbjct 528164 ATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACA--ACATCCAAA 528221 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || || || ||||||| ||||| ||| Sbjct 528222 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 528262 >seq3 Length=1464093 Score = 96.9 bits (106), Expect = 5e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || ||||| |||| || ||| |||| Sbjct 318229 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 318288 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || || || || ||||| || || || || ||| Sbjct 318289 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 318348 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| |||||||| | |||||| ||||| || || || || | Sbjct 318349 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACA-- 318406 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | ||||||| || | || | || || || | ||||| ||||| |||| Sbjct 318407 ACATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGGTG 318457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871935961200