Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq7 179 7e-40 seq3 120 5e-22 >seq7 Length=1865392 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| |||| ||| || || || | ||||| |||||| || || ||||| || Sbjct 634305 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 634364 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || |||| |||||||| ||||| |||||||| ||||||||||||||||| || Sbjct 634365 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 634424 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| || || || |||||| ||| |||||| |||||||| || ||||| ||| Sbjct 634425 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 634484 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| |||||||||||||| || ||||| | || || ||||| Sbjct 634485 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||||| || || || || ||||| Sbjct 634986 ATACCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCA 635045 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || || | ||| ||||| |||||||| |||||||||||||| || Sbjct 635046 GATAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGA 635105 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || ||| ||| || || |||||||| || ||||| Sbjct 635106 GGAATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCC 635165 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||| ||||| ||||| |||| || |||| ||| |||||||| Sbjct 635166 ACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 635215 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || | ||||| || || ||| || ||||| Sbjct 634758 ATACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCA 634817 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || |||||||||||||||||||||| |||||||||||| || Sbjct 634818 GACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGG 634877 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || ||||| || ||||| Sbjct 634878 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCC 634937 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || || ||||| |||| || |||| ||| || ||||| Sbjct 634938 ACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || | ||| | || || || || ||||| Sbjct 635442 ATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCA 635501 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || |||| |||| ||| || ||||||||||| |||||||||||||| || Sbjct 635502 GACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCTGGA 635561 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || ||||| || ||||| Sbjct 635562 GGAATACCTTCCTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCA 635621 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||||| || |||||||| || || |||| ||| |||||||| Sbjct 635622 ACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 635671 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||||| || || ||||| ||||| Sbjct 635214 ATACCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCA 635273 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| || |||||||||||||| | |||||||||||| ||| Sbjct 635274 GATAGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGT 635333 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || || || || || || || || || || Sbjct 635334 GGAATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 635393 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| || ||||||||||||| || || | ||| || ||||| Sbjct 635394 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 127 bits (140), Expect = 4e-24 Identities = 180/253 (71%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 39118 ATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAA 39177 ||| || ||| |||||||| || || ||||||||||| ||| | || ||||||||| | Sbjct 1151038 ATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGA 1151097 Query 39178 AAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAG 39237 ||||||| |||||||||| || |||| || | |||||| || | ||||| | | Sbjct 1151098 AAGTTAAACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCG 1151157 Query 39238 AAAAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTAT 39297 | ||||| | ||| ||||| ||||| || | || |||| | || | | ||| Sbjct 1151158 AGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTAT 1151217 Query 39298 CATCTAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTA 39357 | ||| |||||| | || ||||| ||||| |||| ||||| | || || ||||| | Sbjct 1151218 CGTCTTGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAA 1151277 Query 39358 TAGCTTTAAATAA 39370 | || |||||||| Sbjct 1151278 TTGCATTAAATAA 1151290 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || || || || ||||||| || || || || || Sbjct 528267 ATGATACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAG 528208 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || | || |||||||| |||||||| || |||||||| ||||||||| Sbjct 528207 TCAGACAACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCA 528148 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || || || || || || || || || ||||| || ||| Sbjct 528147 GGTGGGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTATCAGAGGAT 528088 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || || || | ||| ||||| |||||||| || || || Sbjct 528087 TCGACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 528050 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || | || | ||||| || || || || ||||| Sbjct 634530 ATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCA 634589 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | ||| ||||||||||| |||| ||| |||||||| || Sbjct 634590 GACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGA 634649 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| || || || || || || || || || || || || Sbjct 634650 GGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 634709 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| || ||||||||||||| || || | ||| || ||||| Sbjct 634710 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 634759 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 39507 TCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAATGCTAAAACATATTTA 39566 || || ||||||||| ||||||||||| |||||||| ||||| |||| || | | Sbjct 1151427 TCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAACGCTAGGACTCTTGAA 1151486 Query 39567 ATAAAATGTTTTTCA--TT--ATCTTTTAAATTTTCCCAAGATTCAAGATCGTTTGATAA 39622 || |||| | ||||| || || | | | | |||| | || ||| ||| || ||||| Sbjct 1151487 ATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATCCAA-ATCCTTCGATAA 1151545 Query 39623 ATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTATACATTTGATATATATC 39682 ||| | |||||| ||||||||| |||||| | | | | || || ||| | || || Sbjct 1151546 ATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTAAGCTTGCCAAATTTC 1151605 Query 39683 AAAATGTTCAATGGG--AAATAACACATAT-CGTTTA 39716 | || || |||||| ||| |||| || | |||||| Sbjct 1151606 ATGATATTTAATGGGGAAAAGAACAAATCTACGTTTA 1151642 >seq3 Length=1464093 Score = 120 bits (132), Expect = 5e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || | || || || || || | || || || || Sbjct 318464 TTCTTACCACCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTG 318405 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || || | || | || |||||||| ||||||||||| || ||||| |||||| Sbjct 318404 TAGTCGGACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 318345 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || || || || || || ||||| ||||| || || Sbjct 318344 TCAGGTGGGATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAA 318285 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||| |||||||| ||||| || || || || | || |||||||| Sbjct 318284 GATTCAACCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135920800600