Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7 136 4e-27 seq3 120 3e-22 >seq7 Length=1865392 Score = 136 bits (150), Expect = 4e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 24696 TTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAG 24755 |||||| |||||||| || |||| || | || ||||| |||||||| | || || | Sbjct 635679 TTGATATTATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTG 635620 Query 24756 AAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || | | || || | || |||| ||| |||| |||||||||||| ||||| || ||| Sbjct 635619 AATCTTCTGATACCATCGACAACGTTAAGTCAAA-GATCCAAGACAAGGAAGGTATTCCT 635561 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || || ||||| | ||||| ||||| || || || ||||| || |||| |||| Sbjct 635560 CCAGACCAACAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCT 635501 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||| ||||| || |||||||| || || |||||||| ||| |||| Sbjct 635500 GATTACAACATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATT 635454 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || ||||||||||| || || || | ||||| ||| | | Sbjct 635215 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 635156 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||| ||||||||||| || ||||| || ||| Sbjct 635155 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 635096 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || || || || |||||| |||| | || ||||| ||| Sbjct 635095 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 635036 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 635035 ATCCAGAAGGAATCTACTCTTCACTTGGT 635007 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || ||||||||||| ||||| || || ||||| ||| | | Sbjct 634987 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 634928 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 634927 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 634868 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| | || || |||| |||| ||||| ||| Sbjct 634867 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 634808 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||| |||||||| || || |||||||| ||| |||| Sbjct 634807 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATT 634770 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || ||||| ||||||||||| || | ||||| || | || Sbjct 634759 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 634700 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || || || || || || ||||| || ||| Sbjct 634699 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 634640 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | |||||||| || || || || |||||| |||| | |||| ||||| ||| Sbjct 634639 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 634580 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || ||| |||| Sbjct 634579 ATCCAGAAGGAATCTACTCTGCACCTGGT 634551 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || ||||| ||||||||||| || | ||||| || | || Sbjct 635443 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 635384 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| ||||| || || ||||| ||| Sbjct 635383 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 635324 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||| ||||| || || |||||||| ||| |||| | || ||||| || Sbjct 635323 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 635264 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 635263 ATCCAGAAGGAATCTACTCTGCACTTGGT 635235 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | || || ||| || | || || | || | || || | Sbjct 528059 ACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGATACCATTGACAACGTCAAGTCA 528118 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| ||||| || || || || |||||| | || ||||| || || || Sbjct 528119 AAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTAATCTTCGCTGGTAAG 528178 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| |||| |||| || || ||||| ||||||||||| || | ||| Sbjct 528179 CAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAAGGAATCTACTTTGCAC 528238 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | ||||| | || || Sbjct 528239 TTGGTTCTAAGATTGAGAGGTGG 528261 >seq3 Length=1464093 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || | || ||||| || ||||| || || || ||| | | Sbjct 318228 GATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTC 318287 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||| ||||| || || || || || Sbjct 318288 TGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCA 318347 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| | |||| || || || Sbjct 318348 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAA 318407 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| | ||||| | || || || Sbjct 318408 CATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGGTGG 318458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960