Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 235 1e-56 seq6 206 6e-48 seq7 111 4e-19 >seq3 Length=1464093 Score = 235 bits (260), Expect = 1e-56 Identities = 577/869 (66%), Gaps = 23/869 (3%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| |||||||| ||| | |||||| |||| || | | ||||||| || | Sbjct 647447 TATTTCGGTTTCAAGACTTTAGAACGTTCTTACTTGTTAAGGATCAATGGGTTGACTGCT 647506 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || | || ||||| | | | | ||| | ||||||||||| | ||||| ||| Sbjct 647507 GAGAGACCACAACATCTAATAATGAGAGTTAGTTTGGGTATTCATGGTGAAGATATCAAA 647566 Query 110424 GCTGTTATTGAATGTTA-----TGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477 ||| || ||| ||| |||||| ||| || | | || |||||| || Sbjct 647567 TCTGCGATCGAAACTTACAATTTGATGTCATTGAG------GTATTTCATCCATGCTTCT 647620 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537 || || || || || ||||| ||| |||| |||| ||||| || ||| | | Sbjct 647621 CCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGCATCTTGTTTCCTTGTGGCG 647680 Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || || ||||| |||||||||||||||||| | | |||||| ||| | ||||| Sbjct 647681 ATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAAAGAATGTGCCATGATTTCC 647740 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | |||| || ||||| | || ||||| | ||||| || | || | | || Sbjct 647741 AAGACTGCTGGTGGTATTGGGTTGCATATTCATAACATTCGTTCTACGGGTTCTTACATT 647800 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 ||| | || ||| |||| | ||| | | |||||| | | || || ||| ||||| Sbjct 647801 GCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAATGGTTCGTGTTTTTAACAACACT 647860 Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 ||| |||||| |||||||||| ||||||| ||| |||| || | ||| | ||| Sbjct 647861 GCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGCATTCGCCCTTTATTTGGAA 647920 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 || ||||| |||||||| ||||| ||| | || | | || || || || | ||||| Sbjct 647921 CCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAACCATGG---TAAAGAA 647977 Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891 ||| | ||| | |||||||| ||| | |||||| | ||||| |||||||||||| Sbjct 647978 GAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTCCTGATTTGTTCATGAAACGT 648037 Query 110892 GTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGAT 110951 || || | |||| ||| | ||| | | ||| | |||||||| || | ||| Sbjct 648038 GTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTGAAGCTCCTGGTTTAGCAGAT 648097 Query 110952 GTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGC 111011 |||||||| |||| |||||| | | |||||| |||||| |||||||| | | Sbjct 648098 GTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAACAAGAAGGCCGTGGTAGA 648157 Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 || |||| ||||||| | | |||| || | ||| ||||| ||||||||| Sbjct 648158 AAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAGCACAAACTGAAACTGGT 648217 Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 || |||| || | ||||| ||| ||| |||| || ||| |||| ||| | || Sbjct 648218 ACACCTTTCATGCTCTATAAGGATGCAT-GTAATGAAAAGAGTAACCAAAAGAACCTTGG 648276 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||| ||| ||||| || |||| Sbjct 648277 TGTGATTAAATCTTCCAATTTATGTTGTG 648305 >seq6 Length=1554288 Score = 206 bits (228), Expect = 6e-48 Identities = 473/704 (67%), Gaps = 15/704 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAAT-TGGCTTCTT 110523 ||||||||| | ||||| | || |||||||| || | || | | || | |||| | Sbjct 894879 TATTCATGCATCCCCTACATTGTTCAACGCAGGCAC-AGTGAATCAATATCTTTCTTCCT 894821 Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAA- 110582 |||||||| | || || || || ||||||||||| || || | | | |||| || | Sbjct 894820 GCTTTCTTGTTGGTATGAAAGAGGATTCTATTGAGGGAATCTTCAAAAC-CTTAGAGGAT 894762 Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCA 110642 || ||||| || || || || || |||||||||||||| ||| | || | || Sbjct 894761 ACAGCTCTAATCTCCAAGGCGTCGGGCGGAATTGGTATTCATGTTTCCAACATAAGGGCA 894702 Query 110643 AAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGA 110702 | || || || | | | | || ||| |||| | ||| | ||||| ||| || | Sbjct 894701 AGTGGGGCCCATGTGTCTGGATCTAATGGTACTTCTAATGGTATAGTTCCCATGCTACGT 894642 Query 110703 GTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTT 110759 || || || | ||||| | ||||||| | || || || || | | || ||| Sbjct 894641 GTTTTTAATAATACTGCCAGATATGTGGACCAGGGAGGAAACAAGCGTCCGGGTGCATAC 894582 Query 110760 GCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAAT 110819 ||| ||| | ||||| |||||||||||| | ||||| ||| | | | | || || Sbjct 894581 TGTATATATTTGGAACCCTGGCATTCAGATGTTTTTGATTTCCTGCAGTTAAGAAAGAAC 894522 Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879 || || || ||| |||||| | |||||||||| |||| | |||||| ||||||| Sbjct 894521 CATGGTAAGGATGAATTAAGAGCTAGAGATTTATTTTTTGCACTATGGATTCCAGATTTG 894462 Query 110880 TTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939 |||||||| ||||| || ||||| |||||||||| | | || || | ||| Sbjct 894461 TTCATGAAGCGTGTACAGTGCAATGGTGAGTGGTCTCTTTTCAGCCCAGATGAAGCGCCT 894402 Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999 |||||| |||||| || || || ||||||||||| || || ||| |||| | || | Sbjct 894401 GGTCTAAGTGATGTCTACGGTAAGGAGTTTGAAGAGCTATATGAACAATACG-AAGCCAC 894343 Query 111000 GGCAAGTTTCGCAAACAAA----TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055 ||| || ||| ||| || ||| ||| | || |||| | || | || | Sbjct 894342 TGCA---TTGCCAATGAAACGCGTTAAAGCCCAAAAGCTGTGGTCTGAGATTTTGCAAGC 894286 Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAA 111115 ||||| ||||| || ||||| ||| | || || ||| | |||| ||||| || Sbjct 894285 TCAAGTGGAAACAGGCGGTCCTTTTATGCTTTACAAGGATTCTTGTAATTTAAAATCGAA 894226 Query 111116 TCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||| |||| | ||||| ||||||||| |||||| ||||||| Sbjct 894225 CCAAAAGAATCTGGGAACCATTAAGTCTTCTAATTTATGCTGTG 894182 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 305276 AAAATGCTTGA-AATTAATGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCT 305334 ||||| |||| |||| |||| |||| ||||||||| | || |||| |||||| Sbjct 801843 AAAAT--TTGAGAATTGGTGATCTTGTAGAAAGACATTTGGAAGATGGTGATGTGGTTCT 801786 Query 305335 GTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA-AGTAT 305393 ||||| | ||||| || |||| | | | || || | | || | | ||| | | Sbjct 801785 TTTCAACCGTCAACCTTCTTTGCACAGATTATCAATTTTATCACACTATGCCAAGATTCG 801726 Query 305394 TATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTG 305453 | ||||| || ||| ||||||||| | ||| ||||| ||||||||||| ||||| | Sbjct 801725 TCCCTGGAGA-ACCTTTAGATTAAATGAATGTGTCTGTACACCTTATAATGCAGATTTCG 801667 Query 305454 ATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||| |||||||||||| |||| || |||||| Sbjct 801666 ATGGTGATGAAATGAATCTGCACGTTCCTCAA 801635 Score = 95.1 bits (104), Expect = 3e-14 Identities = 134/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||| | | ||| |||||| ||| ||||||| | ||||| || || || |||||||| Sbjct 488358 CATGTTATTGATAATGATCCAGTTTTGTTCAACCGTCAACCTTCTCTTCACAAAATGTCA 488417 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAA--TGTAAGT 305425 |||||||| || || || ||||| | | | ||| |||||| ||||||| ||| || Sbjct 488418 ATGATGGCCCACAAGGTTAAAGTGATGCC-GTATTCGACATTCAGATTAAACTTGTCTGT 488476 Query 305426 G-CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 ||| | || || ||||| ||||||||||| ||||||||||| | || || || || Sbjct 488477 CACTTCT---CCATACAATGCCGATTTTGATGGTGATGAAATGAACTTACACGTTCCACA 488533 Query 305485 ATC 305487 ||| Sbjct 488534 ATC 488536 >seq7 Length=1865392 Score = 111 bits (122), Expect = 4e-19 Identities = 348/531 (66%), Gaps = 21/531 (4%) Strand=Plus/Minus Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548 || ||||| | |||||| |||||| | | || ||| | ||||||||| | || ||| Sbjct 1151569 TTTTGGACAGCTGAAGAAATCGATTTATCGAAGGATTTGGATGATTGGAATAA--TAAGA 1151512 Query 131549 T---TGAA--TGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATG 131603 | |||| ||||| | |||| |||| | ||| || || ||||| || | | |||| Sbjct 1151511 TGAGTGAAGGTGAAAGATATTTCATTTCAAGAGTCCTAGCGTTCTTTGCAGCATCCGATG 1151452 Query 131604 GCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAA 131663 | ||||||| ||| ||| | || |||||| | || | | || || || | | Sbjct 1151451 GTATTGTTAATGAGAATTTGGTGGAGAATTTCTCTGCTGAGGTCCAAATACCGGAGGCTA 1151392 Query 131664 CATCGTTCTACACATTTCAAGCCGCTGTTG-AATCTATTCATAGCGAGATGTATTCATTA 131722 | |||||| || || | || || || ||| ||| || | ||||| || Sbjct 1151391 AGTGCTTCTACGGGTTCCA-GATTATGATGGAAAATATCCATTCTGAAACTTATTCGCTA 1151333 Query 131723 TTGATTGAGAGTCTTGTTAAAAATGAAGAT---GATAAAAATAAATT---ATTTGATGCT 131776 |||||||| | || | | | |||| || ||| | |||| |||| |||| Sbjct 1151332 TTGATTGATAC-CT-----ACAGTAGAGATACCGAGGAAAGTGAATTTTTATTTAATGCA 1151279 Query 131777 GTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGAT 131836 | | || |||| |||| || | || ||||||||||| |||| ||||||||||| Sbjct 1151278 ATTGAAAACATTCCACCAATCAAGGAAAAGGCAGAATGGGCAATTAGGTGGATTCAAGAC 1151219 Query 131837 GATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTT 131896 ||| | || || | || |||| | || || ||||| || |||||| | ||||| Sbjct 1151218 GATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCGCAGTGGAAGGTGTTTTCTTC 1151159 Query 131897 TCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCA 131956 || || | || ||| ||||||||| | |||||| || | ||||| || | | Sbjct 1151158 TCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTAATGCCAGGTTTAACT 1151099 Query 131957 TTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007 || || ||| |||| |||| ||||| |||| ||||| || || |||||| Sbjct 1151098 TTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACAGATTTTGCT 1151048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812693557727