Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7 140 8e-28 seq3 93.3 1e-13 >seq7 Length=1865392 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||||||| |||||| || |||| Sbjct 634516 AAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGATACTATCGATAAT 634457 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| | ||| ||||| || || ||||| ||| || ||| || ||| | || || Sbjct 634456 GTTAAATCTAAA-ATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAGAGATTGATTTT 634398 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| |||||||| || || ||| || | ||||||||| ||||||||||||| Sbjct 634397 TGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAAGAGTC 634338 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 |||||| ||| | ||||| ||||| Sbjct 634337 TACTCTGCACTTGGTTTTAAGACT 634314 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||||||||||||||| |||||| || |||| Sbjct 635200 AAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCTGATACTATCGACAAC 635141 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||| || || |||||||| ||| || ||| || ||| | || || Sbjct 635140 GTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGATTGATTTTT 635081 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | || ||||| || ||||| | ||||||||| ||||||| || ||| Sbjct 635080 GCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAACATCCAGAAGGAATCT 635021 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||||||| | ||| | ||||| Sbjct 635020 ACTCTTCACTTGGTTCTAAGACT 634998 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| ||||||||||| |||||| || |||| Sbjct 634972 AAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCTGATACCATCGACAAC 634913 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| ||| || ||| || ||||| || || Sbjct 634912 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAACAGAGACTAATTTTT 634853 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || || ||||| || || ||| || | ||||||||| | ||||| || ||| Sbjct 634852 GCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAACATTCAGAAGGAATCT 634793 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||| ||| | || |||||| Sbjct 634792 ACTCTGCACTTGGTCTTGAGA 634772 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || ||||||||||| || ||| ||||| || | Sbjct 528043 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGATACCAT 528102 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||| || || ||||| || || ||| |||||| | Sbjct 528103 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 528162 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||||| || ||||| ||||||||||| || || ||| | || |||||| |||| || Sbjct 528163 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 528222 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||| | ||| | ||| Sbjct 528223 GGAATCTACTTTGCACTTGGTTCTAAGA 528250 >seq3 Length=1464093 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || || | || || ||| ||||||| Sbjct 318232 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCTGAC 318291 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || ||||| || || ||| ||| Sbjct 318292 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAA 318351 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||||||||| || || ||| |||| |||||| || Sbjct 318352 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAACATC 318411 Query 206353 CAGAAAGAGTCTAC 206366 || || || || || Sbjct 318412 CAAAAGGAATCCAC 318425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447