Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 179 5e-40 seq4 105 8e-18 seq7 100 4e-16 seq6 93.3 5e-14 >seq3 Length=1464093 Score = 179 bits (198), Expect = 5e-40 Identities = 846/1320 (64%), Gaps = 44/1320 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||| ||||| || ||||| || | |||||||||||||| || || Sbjct 648904 GTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGA 648845 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| || | ||| | | ||| | || || |||| || Sbjct 648844 AGCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTACACCATGTTCTTTAATGCCTTG 648785 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 | | ||||| || || || | || ||| || |||| | ||||| || Sbjct 648784 TCTCAATGGTTCCCAATCCCATAATTCTGAA-GGATTCTTCT-CCCAAAGATCAAATTGT 648727 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 | | |||||||| || ||||| ||| |||| ||| | ||| || | ||| Sbjct 648726 AAAAGACCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCC 648667 Query 110945 AATTCACA-GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 |||||||| | | | |||| || |||| || || |||||||| || | |||| Sbjct 648666 AATTCACAAGATTGT-TCCAAGGCACCGTGGTAAATAGTTTCAAAAATTTGTTGGTTCAA 648608 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGAC 111062 || || ||| || ||||||| | || ||| || ||||| || || | | Sbjct 648607 TATTTTTGCCTCAGGAGATTCAAATG-GCAGACGCAACATCATAAAAGTGTCTGCTAACC 648549 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CT-TTCGCG-CAGTCTCAA 111119 | | |||||| | |||||||||| |||| |||||| || || || || ||| || Sbjct 648548 CATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGG---AA 648492 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | || || | || | |||||||| ||| | ||| |||| | || | || || Sbjct 648491 CTGGGTAGTAGTTACGATCAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTT 648432 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCT--CTT--CATTGAC--ATACTT----- 111228 |||| | ||| || || || | | | | ||| ||| | |||||| Sbjct 648431 CATGTAATTTGGCAAAACT----GTACCATTGTTCCTTACCATCTGCTGATACTTCCACA 648376 Query 111229 -----TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283 ||| | ||||| || || ||||| ||| | || || |||||||| || | ||| Sbjct 648375 CAAGATGGTAATGCGATAGAAGCTAAATTACAAGCTGCAGTTTCATCCTTGTCAGAGTAT 648316 Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343 || | ||||| |||||| |||||| |||||| || | ||||||||||||||| Sbjct 648315 TCCACGATTTCACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTC 648256 Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTG 111403 || | || || |||||||| ||||||||| | || || || || || || |||| || Sbjct 648255 TTTTCATTACATGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCT 648196 Query 111404 AGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT--TGGCCCGTCCCTCCGCC 111460 | ||| || | ||| ||| | | ||| || | || | | | | || || || Sbjct 648195 AAAATGGCATACCACAACTTTTG-AGCT-CTA-ATTGTCTTTCTACCACGGCCTTCTTGT 648139 Query 111461 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 111520 || || | ||| | |||||| || ||||| | || | | ||| || || Sbjct 648138 TCATAACGTTCGTACAATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCT 648079 Query 111521 TTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCT 111580 | |||| ||||||| | ||||| || | || || || |||||||| | || Sbjct 648078 TCACTTGGAGAGAAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCA 648019 Query 111581 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 111640 |||||||| | | || || | |||||| ||| ||||| | ||| ||||| | Sbjct 648018 GGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTT 647959 Query 111641 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 111700 | | |||| ||| || | |||||| | ||||||||| || | ||| | |||| | | Sbjct 647958 CTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCT 647899 Query 111701 CCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 || || | ||| |||||| ||||| || || ||| |||||| || |||| | Sbjct 647898 CCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACC 647839 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 ||||| || | ||||| || |||||| || || ||| ||| | | | Sbjct 647838 ATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGA 647779 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | ||| || |||| ||||||||| ||||| ||| || || ||||| || | Sbjct 647778 ATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTT 647719 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | | |||| ||||| | || || || || || | || | |||||| ||| | | Sbjct 647718 AATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCC 647659 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || ||| ||||| |||||||| || ||||| | || || ||||| |||||| Sbjct 647658 ATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAA-ATACCT 647600 >seq4 Length=1496342 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 || ||| | ||||||||||| || ||||| || || ||| | ||||||||| ||||| Sbjct 1288947 TACGGTAGAGTTGCACCACGTTCAGGTCTTGCCGTAAAGAACGGTATTCAAACCGGTGCT 1289006 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723 |||||||| ||| || || || |||||||| |||||||| || ||||||||| || Sbjct 1289007 GGTGTTATCGATAGAGATTACACTGGTGAAGTTAAAGTCGTCCTGTTCAATCACACTGAT 1289066 Query 164724 AAAGACTTTGA 164734 || |||||||| Sbjct 1289067 AAGGACTTTGA 1289077 >seq7 Length=1865392 Score = 100 bits (110), Expect = 4e-16 Identities = 343/524 (65%), Gaps = 13/524 (2%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||| || |||| | || | |||||| ||||| || |||| Sbjct 1151049 GCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCT 1151108 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 ||||| |||||| ||||||||||||| | || || ||| ||||| || |||||||| | Sbjct 1151109 GGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCA-AATGATCCCGAGAAGAAAAC 1151167 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGC-GAAGGAGCGAGACTTTGCATCAA 122836 ||| ||||| ||||| || | | | ||| || || | || || | | | || Sbjct 1151168 ACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGC-AGTATCGTCTTGAA 1151226 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 ||| | |||||||||| ||||| | || || ||| | ||| || || | || Sbjct 1151227 TCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAA 1151286 Query 122897 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 122956 |||| | |||| ||| || |||| | ||||||||| ||||| |||| Sbjct 1151287 ATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTT 1151346 Query 122957 CGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATC 123015 | ||| | ||| ||| || | || | ||||||| | || || ||| Sbjct 1151347 CAGAATGGATATTTTCCATCATAATCTGGA-ACCCGTAGAAGCACTTAGCCTCCGGTATT 1151405 Query 123016 TGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 123075 || |||||| | | ||||| | | ||||||| |||||| |||||||| | ||| Sbjct 1151406 TGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCA 1151465 Query 123076 AAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCC 123130 ||||| || |||| ||| ||||| | ||||| |||| ||| | |||| Sbjct 1151466 AAGAACGCTAGGA--CTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCC 1151523 Query 123131 AGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 | || || | ||| || || ||||| | |||||| || |||||| Sbjct 1151524 AATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAA 1151567 >seq6 Length=1554288 Score = 93.3 bits (102), Expect = 5e-14 Identities = 303/468 (65%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||| || | || || || | |||||||| |||||| || || ||||||||||| | Sbjct 894109 ACAAACGTGGGTAGTGCCACTGATGCCAGATTGCACACTGCAGTCTCATCCTTGGAACTA 894168 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 || |||| |||||| ||||| || ||| |||||| || |||| |||||||||||| Sbjct 894169 TATTCTACAATTTCACAGCATAAATTAGAAGACTTAATGGTTCCCAGATTCTTTTGGTTC 894228 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 || || || | ||||||||| ||||| | || || || ||| || | | Sbjct 894229 GATTTTAAATTACAAGAATCCTTGTAAAGCATAAAAGGACCGCCTGTTTCCACTTGAGCT 894288 Query 111401 TTGAGAATAGCCTTCCAAACATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGC 111459 | | ||| | ||| | | |||| || | | |||| | | | || Sbjct 894289 TGCAAAATCTCAGACCACAGCTTTTGGGCTTTAACGCGTTTCATTGG-CAATGCAGTGGC 894347 Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 111519 ||||| | | || || |||||||||||| ||| | || ||||| || || Sbjct 894348 TTCGTATTGTTCATATAGCTCTTCAAACTCCTTACCGTAGACATCACTTAGACCAGGCGC 894407 Query 111520 CTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTC 111579 | ||||| | |||||||||||| | |||| || || ||||||||||| | || Sbjct 894408 TTCATCTGGGCTGAAAAGAGACCACTCACCATTGCACTGTACACGCTTCATGAACAAATC 894467 Query 111580 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 111639 ||||||||| || | |||| | ||||||| | || || | ||| ||||| Sbjct 894468 TGGAATCCATAGTGCAAAAAATAAATCTCTAGCTCTTAATTCATCCTTACCATGGTTCTT 894527 Query 111640 TCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 111687 || ||||| ||||| || | | ||| | ||||| || || | ||| Sbjct 894528 TCTTAACTGCAGGAAATCAAAAACATCTGAATGCCAGGGTTCCAAATA 894575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031945047200