Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 159 8e-34 seq3 159 8e-34 seq2 113 1e-19 >seq7 Length=1865392 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||||||| || | ||||||||| || || || |||||||| ||||| | | || || Sbjct 634998 AGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTG 635057 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || || ||||| ||||| || || | | |||||||| ||||||| ||||| Sbjct 635058 CCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCT 635117 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| ||| ||||| ||||| || ||||| ||| || || | |||| Sbjct 635118 TTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTG 635177 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| || || | |||||| Sbjct 635178 ATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 635215 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| | ||| || || ||||||||||| || || | | || || || Sbjct 528250 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 528191 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || |||||||| | | |||||||||||| || | |||||||| Sbjct 528190 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 528131 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| |||||| || ||||| || ||||| |||||| ||| ||||| | |||||| Sbjct 528130 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTATCAGAGGATTCGACCTCCAAAGTGAT 528071 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 528070 GGTCTTACCAGTCAAAGTCTTGACAAA 528044 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || ||||| ||||| || || || |||||||| ||||| | ||||| || || Sbjct 634544 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 634603 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || || ||||| || || ||||| || | ||||||||| ||||||| || ||||| Sbjct 634604 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 634663 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||| ||||||||||| || || || || | |||||| Sbjct 634664 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 634723 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || |||||||| || || | ||||| Sbjct 634724 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 634759 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||||||||| || || |||||||| ||||| | | || || || Sbjct 635456 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 635515 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || || || | | |||||||| ||||||| |||||||| Sbjct 635516 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 635575 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||||||| || ||||| |||||||| ||||| ||||||||| | || || Sbjct 635576 GTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 635635 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | |||||| Sbjct 635636 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 635671 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||||||| || | ||| ||||| || || || ||||| || ||||| | || || || Sbjct 635226 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 635285 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||||||||||||||| || || || || || | |||||||| || |||| |||||| Sbjct 635286 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 635345 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| |||||| || ||||| ||||||||||| || || || || | |||| Sbjct 635346 TTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 635405 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || |||||||| || || | ||||| Sbjct 635406 ATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | ||| ||||| |||||||| |||||||| ||||| | || || || Sbjct 634314 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 634373 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| ||||| || || | | |||||||||||||||| |||||| Sbjct 634374 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 634433 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| || || ||| || || ||||| || ||||| ||| || || | |||| Sbjct 634434 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 634493 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | || || ||||| | ||||| Sbjct 634494 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || || || ||||| ||||| | || || || || Sbjct 634772 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 634831 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || || || || || | |||||||| || |||| |||||||| Sbjct 634832 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 634891 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || ||||| |||||||| ||||| ||| || || |||||||| Sbjct 634892 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 634951 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| || || | ||||| Sbjct 634952 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 >seq3 Length=1464093 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | ||| | ||||| || ||||||||||| || || | | ||| || || Sbjct 318444 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 318385 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 318384 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 318325 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| || || || ||||| |||||||| ||||||||| || || || Sbjct 318324 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 318265 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| ||||| | |||||| Sbjct 318264 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 >seq2 Length=1388208 Score = 113 bits (124), Expect = 1e-19 Identities = 363/557 (65%), Gaps = 10/557 (2%) Strand=Plus/Minus Query 139431 AATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTC 139490 |||||| || | ||| ||||||| || || |||||||| || |||| ||| | || || Sbjct 471885 AATGTTAACAGATGAATATGGTACCGCATCTAACATTAAATCAAGAGTTAACCGTCTATC 471826 Query 139491 TGTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAA 139550 ||| | || || ||| || |||||| ||||||||| | || ||| Sbjct 471825 CGTTTTATCTGCCATTACTTCTACTCAACAAAAGCTAAAACTTTACACTAAAGTTCCACC 471766 Query 139551 GAACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCCCGAAGGCAAGGAGAAAAAGGT 139610 || || | || || | | | || | |||| | ||||| ||||| || || || Sbjct 471765 AAATGGTTTAGTTATCTATTGTGGTGATATTATCAATGAAGAAGGTAAGGAAAAGAAAGT 471706 Query 139611 TGCATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTT-TACGCATGCGACAGTG 139669 | ||||||| || ||||||| ||||||| | | | || || || || | Sbjct 471705 TACATTCGATATCGAACCTTATAAGCCAATCAAC-ACATCCTTATATTTGTGTGATAACA 471647 Query 139670 TTTTCCATACGGATTGTCTGAAAGATCTGTTGTA---TGATGACCAATCTTATGGTTTTA 139726 |||||||| || ||| ||| ||| || | ||||||| ||| ||||| | Sbjct 471646 AATTCCATACTGAAGTTCTATCAGAACTGCTGGAAGCTGATGACAAATTC---GGTTTCA 471590 Query 139727 TTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAACAA 139786 || | ||||||| || || |||| | ||||| || | || ||||| Sbjct 471589 TTGTTATGGATGGTCAAGGATCCTTGTTTGGTTCGCTTTCTGGTAACACCAGAACCGTTT 471530 Query 139787 T-CTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTG 139845 | | | | ||| || ||| | |||||||| ||||| ||||| |||||||||||| || Sbjct 471529 TGCACAAATTTTCA-GTTGATTTACCAAAGAAACACGGTAGAGGTGGACAATCTGCTATG 471471 Query 139846 CGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAAC 139905 ||||| | | | | || | |||||||| || ||||| |||||||||| ||||| Sbjct 471470 CGTTTCGCACGTTTAAGAGAAGAAAAGAGACATAACTATGTGAGAAAAGTGGCAGAAGTT 471411 Query 139906 GCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGT 139965 || |||| ||| |||| || | ||| | |||| ||| | ||||||| ||| Sbjct 471410 GCTGTACAAAATTTCATCACTAACGATAAGATTAATGTTAAAGGTTTGATTTTGGCTGGT 471351 Query 139966 TCCGCAGAGTTCAAGAC 139982 || ||||| |||||||| Sbjct 471350 TCAGCAGATTTCAAGAC 471334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151896038555