Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7 122 6e-23 seq3 98.7 7e-16 >seq7 Length=1865392 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || |||||| | || || ||||| |||||| | ||||| || || | Sbjct 634531 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 634472 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || ||| ||||| | |||| || ||||| |||||| | || || || || Sbjct 634471 GATACTATCGATAATGTTAAATCTAAAA-TTCAGGACAAGGAAGGTATTCCTCCTGACCA 634413 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || ||||| || || ||| ||||||||| | ||| | |||||||| Sbjct 634412 ACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAA 634353 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || |||||||| || | || || |||||||| | |||| ||| Sbjct 634352 CATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 634304 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||| || || || || || || |||||| | ||||| || || | Sbjct 635215 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 635156 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| | || | | ||| || || ||||||||||| | || ||||| ||| Sbjct 635155 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 635096 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||| || || ||||| || || | | |||||| ||||||||| Sbjct 635095 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 635036 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || || || || || | || || ||| |||| Sbjct 635035 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAG 635001 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||| || | || || || || || || | || ||||| || | Sbjct 635671 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 635612 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || || |||| |||| | | ||||| |||||| | || ||||| || Sbjct 635611 GATACCATCGACAACGTTAAGTCAAAGA-TCCAAGACAAGGAAGGTATTCCTCCAGACCA 635553 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || ||||| || || ||||||||||||| | ||||| |||||||| Sbjct 635552 ACAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAA 635493 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || ||||| | || || || || || || |||| || Sbjct 635492 CATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 635445 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| || || || || || || |||||||| ||||| || || | Sbjct 634987 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 634928 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || || ||||| |||||| | || ||||| ||| Sbjct 634927 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 634868 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | |||| ||||| || |||||| | ||||||| | ||| | ||||||||| Sbjct 634867 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 634808 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || || || | || || || || || || |||| || Sbjct 634807 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGG 634761 >seq3 Length=1464093 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | ||||| || || || || || || ||||| || | Sbjct 318229 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 318288 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || ||| ||||| |||||| | || || || || Sbjct 318289 GACACTATCGACAATGTCAAGTC-CAAGATTCAGGACAAGGAAGGTATCCCACCTGACCA 318347 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||| ||||||| | | || || ||| ||||| Sbjct 318348 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAA 318407 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| || || || || | || ||| |||| || Sbjct 318408 CATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 318455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009571163556