Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7 125 2e-23 seq3 102 2e-16 >seq7 Length=1865392 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || || || |||||||| || || |||||||||||||| | | ||||| || Sbjct 634544 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 634603 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || || ||||| || || || ||||| | | || || ||||| Sbjct 634604 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 634663 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| ||| ||||| | || | | |||| ||| ||| ||||| | ||| || Sbjct 634664 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 634723 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||| || || |||||||| ||||||| ||||| ||| |||| ||| Sbjct 634724 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCATACCACCTCTTAATCT 634774 Score = 111 bits (122), Expect = 4e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || || || ||||||||||| | | |||||| || ||||||| Sbjct 634781 CAAG-TGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTA 634839 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || || || || ||||| ||||| | | || |||||||| ||||| | Sbjct 634840 ATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGA 634899 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | | || ||| || ||||| ||||| ||||| || | Sbjct 634900 TCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTAC 634959 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || |||||||| ||||| | ||||| ||| |||| ||| Sbjct 634960 CGGTTAGAGTCTTAACGAAAATTTGCATACCACCTCTTAGTCT 635002 Score = 111 bits (122), Expect = 4e-19 Identities = 167/236 (71%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| || || | ||||||||||| || || |||||||||||||| | ||||||| Sbjct 634995 CTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTT 635054 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || || || | ||||| ||||| | | || ||| Sbjct 635055 CTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCT 635114 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || |||||| | || | | || ||| || ||||| | | Sbjct 635115 TCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAA 635174 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || || || || || |||||||| ||||| | |||||| ||| |||| ||| Sbjct 635175 GTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCATACCACCTCTTAGTCT 635230 Score = 104 bits (114), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || || |||||||||||||| | |||||||| || ||||| | Sbjct 635465 CAAG-TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCA 635523 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || || || | ||||| ||||| | | || |||||||| ||||| Sbjct 635524 GTTGCTTT--CCAGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 635581 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| || || | || | | | || ||| || || || | |||||||| || Sbjct 635582 GATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTT 635641 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||| | |||||| Sbjct 635642 ACCAGTCAAAGTCTTAACGAAAATCTGCAT 635671 Score = 102 bits (112), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||||||||| |||||||||||||| | | |||||| || ||||| | Sbjct 634325 CAAG-TGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCA 634383 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || || | ||||| ||||| | | || |||||||| || |||| Sbjct 634384 ATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAA 634443 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || ||| || ||||| | ||| || ||||| | Sbjct 634444 TTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTAC 634503 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || | || ||||| |||| ||||| ||| |||| ||| Sbjct 634504 CAGTCAAGGTTTTCACAAAGATTTGCATACCACCTCTTAATCT 634546 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || |||||||||||||| || | || ||||| |||||||| | Sbjct 528241 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCCA 528183 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || || ||||| | | ||| |||||||| || |||| Sbjct 528182 ATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 528123 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | | || || || || || | ||| || || || | Sbjct 528122 TCTTTGACTTGACGTTGTCAATGGTATCAGAGGATTCGACCTCCAAAGTGATGGTCTTAC 528063 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | |||||| || || Sbjct 528062 CAGTCAAAGTCTTGACAAA 528044 >seq3 Length=1464093 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || | || || || |||||||||||||| |||| || ||||| || Sbjct 318444 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 318385 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 318384 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 318325 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || |||||| | || | |||| ||| || || || || ||||| Sbjct 318324 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 318265 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| | |||||| || || | |||||| Sbjct 318264 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820696516697