Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 172 1e-37 seq7 161 2e-34 >seq3 Length=1464093 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | ||| |||| || || ||| ||| ||||||||||||||||| | Sbjct 318456 ACCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 318397 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||||| || | ||| || || ||||||||||| | |||||||||| | Sbjct 318396 CAAG-GTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 318338 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | ||||| |||||||| || ||||| | || || | ||||||||||| |||| ||| | Sbjct 318337 GGATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAA 318278 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || || |||||||||||||||||||| || || |||||||| Sbjct 318277 CCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 >seq7 Length=1865392 Score = 161 bits (178), Expect = 2e-34 Identities = 151/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| | || | ||||||||| ||||| || || ||||| Sbjct 635024 TTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAA 635083 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||| ||||| || || ||||| |||||||| | ||| ||| | Sbjct 635084 AATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTT 635143 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||||| || |||| ||| ||||| | |||||| |||||||| || | ||||||||| Sbjct 635144 GTCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAAC 635203 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 635204 GAAAATCTGCAT 635215 Score = 158 bits (174), Expect = 3e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| || || | ||||||||| ||||| || || ||||| Sbjct 634568 TTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAA 634627 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | ||||||||| |||||||||||||| || || ||||||| || ||| | Sbjct 634628 GATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTT 634687 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| |||| |||||||| | |||||| || ||||| || | |||||| || Sbjct 634688 GTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGAC 634747 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 634748 GAAGATTTGCAT 634759 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| | || | || || || ||||| || || ||||| Sbjct 635480 TTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAA 635539 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||| |||||||| ||||||||||||||||||| || ||| | Sbjct 635540 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTTGACTTAACGTT 635599 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||| ||| || || | || || |||||||| |||||||||||||| Sbjct 635600 GTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAAC 635659 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 635660 GAAAATCTGCAT 635671 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || |||||||| |||| || || | || || |||| |||||| || ||||| Sbjct 634796 TTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 634855 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | | |||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 634856 AATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 634915 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||| ||| ||||| |||||||| |||||||| || | ||||||||| Sbjct 634916 GTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAAC 634975 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 634976 GAAAATTTGCAT 634987 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| || || || ||| ||||||||||||||||||| Sbjct 528262 ACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 528203 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||| | ||||| || | ||| || || || ||||| || | |||||||||| || Sbjct 528202 CAACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 528143 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| || ||||||| || ||| | || || || || || | |||||| Sbjct 528142 GATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTATCAGAGGATTCGAC 528083 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || | |||||| |||||||| ||||||||||| || || Sbjct 528082 CTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 528044 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| || || | || || || | ||| || || ||||| Sbjct 634341 TCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAA 634400 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||||||| |||||||| |||||||| || || || | ||| || || Sbjct 634401 ATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATTTTAGATTTAACATTA 634460 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 |||||||| || |||| ||| ||||| | |||||| || ||||| ||||| || || || Sbjct 634461 TCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACA 634520 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 634521 AAGATTTGCAT 634531 Score = 86.0 bits (94), Expect = 1e-11 Identities = 291/439 (66%), Gaps = 16/439 (4%) Strand=Plus/Minus Query 229980 GTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGC-GCCATCTTTTGGCTACGCAACAAGGG 230038 || || ||| || | ||||| |||| | ||| |||||||||||| | || ||||| Sbjct 1151176 GTGGAAGGTGTTTTCTTCTC-GGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGG 1151118 Query 230039 CGTCATGCCCGGGCTCGGTCTGTCGAACGAATTCATCAGCAGGGACGAAGGTCTTCAC-C 230097 | ||||| || | | | || || ||||| ||| | || ||||||||| | ||| | Sbjct 1151117 TCTAATGCCAGGTTTAACTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACAC 1151058 Query 230098 AGCAATTTGGCGAGGTCTTGTATTCG--AAGCTAAATAACAAACTACCTTTCGAAACGGT 230155 || |||| || |||| |||||| | | || |||| || | | || | || Sbjct 1151057 AG--ATTTTGC-TTGTCTATTATTCGCCCATTTGAAGAACAGACCAAGTCCAGACATTGT 1151001 Query 230156 GAAACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTG-CGACGCTAT-T 230213 | || |||| | || |||| || ||| ||| || ||| | |||| || ||| | Sbjct 1151000 GGAAAGAATCATTACTGAAGCTGTATCAATTGAGAA-GAGATACTTTGAAGATGCTCTCC 1150942 Query 230214 CCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCT 230273 || || | ||| | |||||||| || | || ||| ||||| |||| || || ||| Sbjct 1150941 CCGTGGC-TCTGCTGGGCATGAACGCCGCGCTAATGAATCAATACGTCGAGTTTGTTGCT 1150883 Query 230274 GATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCT 230333 || | || | ||||| || || | |||||| |||||| | ||||| |||| Sbjct 1150882 GACAGACTTCTGGTGGCTCTTGGTAATGAGAAATACTATAACGTGACAAACCCATTCGAC 1150823 Query 230334 TTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTT--CGAAAAGCGTGTCAGCG 230391 ||||||||| ||| || || || || ||||| ||||| |||||| || || | Sbjct 1150822 TTTATGGAGAACATCTCTCTAGCCGGTAAGACTAATTTCTTTGAGAAAAGAGTTTC--TG 1150765 Query 230392 ATTATCAAAGGCCCGGTGT 230410 ||||||| | | | ||||| Sbjct 1150764 ATTATCAGAAGGCTGGTGT 1150746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578