Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12-
08] 220 sequences; 19,469,227 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 168 7e-37
seq15 156 4e-33
>seq6
Length=912967
Score = 168 bits (186), Expect = 7e-37
Identities = 387/577 (67%), Gaps = 17/577 (3%)
Strand=Plus/Plus
Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282
||||||||||| | ||| | ||| || || |||||||| ||||||||| || |||
Sbjct 170979 CCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGGCATTAGACCCTTCTTC 171038
Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342
|| ||||| || || ||||||||||| ||||| ||||| | ||| || || | |||||
Sbjct 171039 TTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACCTTCCACTGCGGCAAAG 171098
Query 16343 GCGATTAATCGTTCCGCGTA---CGTAGCATCTTTATTACGAATCCATTTCTGTACCCAT 16399
|| | ||||| ||| || || | || ||| | | ||||||| | | |||||
Sbjct 171099 GCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTT---GAATCCACCTAATTGCCCAT 171155
Query 16400 TCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCC 16459
|| || |||| || || || |||| || || ||||| || || |||||
Sbjct 171156 TCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAAAAATTCACTTTCC 171215
Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519
| |||| | | || |||||||||| || || |||| || || || || ||
Sbjct 171216 TCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGAATGGATATTTTCC 171275
Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC--CACGTAAA 16577
|| ||||| || || |||||||| |||||||| |||||| || || || |||
Sbjct 171276 ATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGACCTCAGCAGAGAAA 171335
Query 16578 ATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGT 16637
|| ||| ||| |||||||| || ||||| || ||| ||||| ||||| | |
Sbjct 171336 TTC--TCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAACGCTAGGA--C 171391
Query 16638 GCTT--AATGAAATATTTTT---CGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTT 16692
||| |||||||||| ||| | ||| | | ||| |||||| | ||||| ||
Sbjct 171392 TCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATCCAAATCCTT 171451
Query 16693 GGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCA 16752
|||| ||| | |||||| | |||||||| || |||| | || || || |||
Sbjct 171452 CGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTAAGCTTGCCA 171511
Query 16753 AATATCATTGTATTGTATGGGAAATACGACGTATCTA 16789
||| |||| |||| ||||| || | || |||||
Sbjct 171512 AATTTCATGATATTTAATGGGGAAAAGAACAAATCTA 171548
>seq15
Length=608780
Score = 156 bits (172), Expect = 4e-33
Identities = 297/434 (68%), Gaps = 4/434 (1%)
Strand=Plus/Plus
Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257
|||||| || |||||| ||| | ||||||||||||| || | |||||| || || ||
Sbjct 278984 TAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGT 279043
Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317
|| |||||||| || ||||| ||||| || || ||||| || ||||| || ||
Sbjct 279044 TAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAA 279103
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377
||| ||||| ||||| | ||||| |||| ||||| ||| || || || |||| ||
Sbjct 279104 GAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATC 279163
Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437
||||||| | ||||||| || |||| | | || || |||| |||||
Sbjct 279164 TTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGC 279223
Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497
||||| || || |||| || | | || |||||||||| ||| |||
Sbjct 279224 ATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTA 279283
Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557
| |||| ||||| ||||| || || || || || || |||||||| || || |
Sbjct 279284 CGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGG 279343
Query 16558 TATTTGTACTTCCACGTAAAATCGTTC-CG-CCAGGTTCTCATTCACGATACCGTCACTT 16615
||||| ||||| | | || |||| || ||| ||||||||||| |||||||| |
Sbjct 279344 AATTTGCACTTCGGCAGAGAA--GTTCTCGACCAAATTCTCATTCACAATACCGTCGGAT 279401
Query 16616 GCAGCAAAAAACGC 16629
||||| || |||||
Sbjct 279402 GCAGCGAAGAACGC 279415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511412993610400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |