Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 1e-13 seq16 82.4 5e-11 >seq7 Length=903076 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 12784 GTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCTTTA 12843 ||||| ||| |||| |||||| ||||| ||||| ||||||||||| || || || | Sbjct 342541 GTCATACGAGATGGAATGGCATGAGGGTTGATGATCAAATCAGGTACAATACCTTCAGCA 342482 Query 12844 GTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTAAAA 12903 || || ||||| | |||| |||| | |||||| |||||| ||||| || | | Sbjct 342481 GTAAATGGCATATCTTCTCTACCATAGGTAATACCAATGGTACCCTTTTGACCGTGACGA 342422 Query 12904 GAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTTAACAA 12961 || ||||||||||| || |||| || || || | || || | || |||||||| Sbjct 342421 GATGCAAATTTATCACCGATTTGTGGGATCTTGGTAGTTCTCACACGAACTTTAACAA 342364 >seq16 Length=577445 Score = 82.4 bits (90), Expect = 5e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 12784 GTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCTTTA 12843 ||||| ||| |||| |||||| ||||||||||| ||||||||||| || || || | Sbjct 43262 GTCATACGAGATGGAATGGCATGAGGGTTAATGATCAAATCAGGTACAATACCTTCGGCA 43321 Query 12844 GTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTAAAA 12903 || || ||||| | |||| | ||| | ||||| |||||| ||||| | | | Sbjct 43322 GTAAATGGCATATCTTCTCTACCGTAAGTAATACCGATGGTACCCTTTTGACCATGACGA 43381 Query 12904 GAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTTAACAA 12961 || ||||| ||||| || || | || ||||| | || || | || |||||||| Sbjct 43382 GATGCAAACTTATCACCGATCTGTGGAATTTTGGTAGTTCTCACACGAACTTTAACAA 43439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328363919571880