Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq15 122 8e-23 seq12 100 2e-16 seq25 93.3 4e-14 >seq15 Length=608780 Score = 122 bits (134), Expect = 8e-23 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 44803 AAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACTTTG-GCCGAACGAT 44861 |||||| |||||||| || | || ||| | |||||| | | |||| || ||| ||| Sbjct 279194 AAAGGCAGAATGGGCCATTAGGTGGATTCAAGATGAAGA-AGCCCTTTATGCTGAAAGAT 279136 Query 44862 TGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCGATATTTT 44921 | |||||||| ||| || ||||| | ||||| || ||| ||| || || || |||| Sbjct 279135 TAGTCGCATTTGCCGCAGTTGAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTT 279076 Query 44922 ACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAG 44981 |||| | ||||| ||||||| || || || || ||||||||||||| |||| Sbjct 279075 GGTTGAAGAAGAAGGGTCTGATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAG 279016 Query 44982 ACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTAT 45019 |||||||| |||| ||| |||||||||| |||| ||| Sbjct 279015 ACGAAGGTTTGCATACCGACTTTGCCTG--TCTATTAT 278980 >seq12 Length=625618 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | || ||| || |||||||| | ||||| || ||||||||||| || || Sbjct 614631 ACCACCTCTTAGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGA 614690 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || | |||||| || || || || || |||| || | ||||| || || || Sbjct 614691 TAAGGTTCTACCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGG 614750 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||||||| ||| ||| ||||| | |||| |||||| | | || || Sbjct 614751 AATACCTTCCTTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCAC 614810 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | || | ||||| || || |||||||| ||||| || ||||| Sbjct 614811 CTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||| || ||||| || | |||||||| ||||| ||||| |||||| Sbjct 614858 TACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGG 614917 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | |||||| || ||||| || || |||| || | ||||| || || | Sbjct 614918 ATAAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTG 614977 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || || ||| ||| || || | |||| ||| || | || | Sbjct 614978 GAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCA 615037 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | |||||| ||||||||||| || || ||||||||||| Sbjct 615038 CTTCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 >seq25 Length=339617 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | |||| ||| | ||||| || || || ||||||||||| Sbjct 150080 TACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAG 150139 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| || || || ||||| |||| || | || || || |||| Sbjct 150140 ACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAG 150199 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| || ||| ||| || || | |||| |||||| | ||||| Sbjct 150200 GAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 150259 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || ||||| || || ||||| ||||| Sbjct 150260 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| |||||||| | || || || || || ||||||||||| Sbjct 150308 TACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAG 150367 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | || || || || |||||||| | || | | ||| || || |||| Sbjct 150368 ACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAG 150427 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| || ||| ||||| | |||| ||| || | || | Sbjct 150428 GAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAA 150487 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| ||| || || ||||||||||| Sbjct 150488 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829236792240