Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq6 199 4e-46 seq15 158 1e-33 >seq6 Length=912967 Score = 199 bits (220), Expect = 4e-46 Identities = 544/825 (66%), Gaps = 11/825 (1%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || ||||| ||| |||||| || ||||||||||| || || || ||| || || || Sbjct 170667 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 170726 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 |||||||| || || || ||| | ||||||||| || || | ||| || Sbjct 170727 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 170786 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 | ||| || || ||||| || | || || ||||||| | |||||| || | | Sbjct 170787 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 170846 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttt-tCTATATTAACCGCTTCAATGATTAT 16182 || |||| || ||| | ||| || | || || || || |||||| | || || Sbjct 170847 GCCACGGGGAGAGCATCT-TCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGAT 170905 Query 16183 ATCTCTTACTACACTATTTA-AC--GGAGGGTTTAATAAGTGTTTAAACATTATACAAGC 16239 |||| | ||| | | | || || ||| || || || | || |||||| Sbjct 170906 ---TCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGC 170962 Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299 |||||| ||||| |||||||| |||| || || || || || || || | |||||| Sbjct 170963 AAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGG 171022 Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359 |||||| || || || | |||||| || || |||||||| || || ||||| | ||| Sbjct 171023 CATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACC 171082 Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcca 16419 ||| ||||||||||| || || |||| ||| | || | | | || ||||| Sbjct 171083 TTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGAATCCA 171142 Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479 | | ||||| | ||| |||| || | ||||| || |||||||||||||| Sbjct 171143 CCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAA 171202 Query 16480 ATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGA 16539 | | | |||| | | ||||| | | || ||||| || | || ||| |||| || Sbjct 171203 AAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGA 171262 Query 16540 ATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC 16599 ||| ||||| ||||| ||||| || || || ||||| |||| || | |||||| || Sbjct 171263 ATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGAC 171322 Query 16600 TTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAA 16659 |||| | || | || | || || || ||||| || |||||| |||||||| || Sbjct 171323 CTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 171382 Query 16660 CGCAAGTATGTGTTTAATAAAAttttttt--CGTTATCTGAAAGTTTTA-ACCAGTCAGA 16716 ||| || | | ||| |||| | ||| | || || | | ||| ||| ||| Sbjct 171383 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 171442 Query 16717 AAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 ||||| || |||||||||| ||||| | |||||||| || || Sbjct 171443 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGC 171487 >seq15 Length=608780 Score = 158 bits (174), Expect = 1e-33 Identities = 567/871 (65%), Gaps = 23/871 (3%) Strand=Plus/Plus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 |||||||| ||||||||||| || || || ||| || || ||||||||||| || || Sbjct 278712 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 278771 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAA-TCTATCCGCCAC 16077 |||||| | | ||||| || ||| | |||| | || | || ||| || || || Sbjct 278772 GGATTTGTGACATTGTAGTACTTTTCGT-TACCAAGAGCCACTAGAAGTCTGTCGGCAAC 278830 Query 16078 AAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGC 16137 ||||| | || || ||||||| | |||||| || | | || |||| || Sbjct 278831 GAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAGC 278890 Query 16138 TTCTGTTAAAAAAttt-ttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196 ||| | ||| || | ||||| || ||| |||||| | || || | || | ||| Sbjct 278891 ATCT-TCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCT---TTTCCACAA 278946 Query 16197 TATTTA-ACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253 ||| | || | | | || ||||| || | || ||| ||||| || ||||| Sbjct 278947 TATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCA 279006 Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313 | |||||||| || | || || ||||| || || || ||||||||||| || || | Sbjct 279007 AACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCT 279066 Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373 | || | |||||| || || || || || || || ||||| ||||||||||||||||||| Sbjct 279067 TCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAA 279126 Query 16374 ATGCAACCAATCGCTCACCGT-ACGTTCTAtttttactttctatccattttttagcccaa 16432 |||| || |||| ||| | | | | || | || | || ||||| | | ||||| Sbjct 279127 ATGCGACTAATCTTTCAGCATAAAGGGCT-TCTTCATCTTGAATCCACCTAATGGCCCAT 279185 Query 16433 tttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCT 16492 | ||| |||| | | | ||||| || || ||||||||||| ||| || Sbjct 279186 TCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCC 279245 Query 16493 TTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCC 16552 ||| || | | || ||||| || | ||| ||| |||| || || || || ||| Sbjct 279246 TTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTCC 279305 Query 16553 ATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAAC 16612 || || || || || || ||||| | ||||| | ||||| ||||| | | || Sbjct 279306 ATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAAG 279365 Query 16613 CTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGT 16672 | || | || || || || || || || ||| || || || ||||| || | | Sbjct 279366 TTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAGCGAAGAACGCTAGAACTCTT 279425 Query 16673 TTAAT--AAAAttttt----ttCGTT-ATCTGAAAGTTTTAACCAGTCAGAAAAATCTTT 16725 ||| ||||| ||| ||||| |||| ||| | ||||||| ||||| | Sbjct 279426 GAAATGAAAAATCTTTCACCCTCGTTCATCT---TGTTGT-TCCAGTCATCCAAATCCTG 279481 Query 16726 TGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785 ||||||| |||||| | ||||| || || || | || | || || || ||| Sbjct 279482 CTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTCTCTTGTAGGCTTGCCA 279541 Query 16786 TATGTCTTCGTAAACAATAGGAAACACAACA 16816 || || | ||| |||||| || | |||| Sbjct 279542 GATTTCGTGGTATTGAATAGGGAAAAGAACA 279572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510728092000