Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 120 6e-22 seq3 91.5 3e-13 seq1 86.0 1e-11 >seq15 Length=608780 Score = 120 bits (132), Expect = 6e-22 Identities = 359/545 (66%), Gaps = 18/545 (3%) Strand=Plus/Minus Query 101820 TCTTGTTTAACGCTGCACAACACTTCCCCGCCATCA-AGAAGAAGGAGCAGTGGGCTATT 101878 |||| ||||| || || || |||| | |||| |||| | | || | ||||| ||| Sbjct 279234 TCTTATTTAATGCCATTGAAAACATCCCACCAATCAGAGAAAAGGCAGAA-TGGGCCATT 279176 Query 101879 AATTGGATGCAA-AGCAATAA--CGATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTT 101935 | ||||| ||| | || || | || || ||| | | || || ||||| |||||| Sbjct 279175 AGGTGGATTCAAGATGAAGAAGCCCTTTATGCTGAAAGATTAGTCGCATTTGCCGCAGTT 279116 Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| |||||||| || | ||||| |||| || ||| | ||||| | |||| | Sbjct 279115 GAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTG 279056 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||||| |||| ||| || || || |||| || ||||||||| | ||| |||| Sbjct 279055 ATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGAC 278996 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG-ATACCCCATCAAGAGAAAGGATTCT 102114 ||||| |||| | | | | ||| || | | |||| | ||| | Sbjct 278995 TTTGC-------CTGTCTATTATTCGCTCACTTGAATCACAGACCAAGTCCAGATATTGT 278943 Query 102115 TGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGA-ATTTCTCACAGTTTCCCTGC 102170 ||| ||| | |||||||| || ||||||| |||| || | || | | || | Sbjct 278942 GGAAAAGATTATTACTGAAGCTGTTTCAATTGAA-AAGAGATACTTTGAAGATGCTCTCC 278884 Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230 | || | |||| |||||| | | | |||| ||| ||| | ||||| || || | Sbjct 278883 CCGTGGCTCTGCTGGGCATGAACGCCGCGCTAATGAACCAATACGTCGAATTCGTTGCCG 278824 Query 102231 ATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCAT 102290 | | ||| | || | | || |||||| |||| ||||| || || || ||| | Sbjct 278823 ACAGACTTCTAGTGGCTCTTGGTAACGAAAAGTACTACAATGTCACAAATCCATTCGACT 278764 Query 102291 TCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGT 102350 | ||||| || || || || | | ||||||||| || ||||| ||||||||| |||| | Sbjct 278763 TTATGGAAAACATCTCTCTAGCGGGTAAGACCAATTTCTTTGAGAAGAGAGTCTCCGATT 278704 Query 102351 ATCAA 102355 | ||| Sbjct 278703 ACCAA 278699 >seq3 Length=965618 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241 |||||||||||||||||| || |||||||| || || |||| ||| | |||||||| Sbjct 325266 TGCGATAGAAGCCAAATTACAAACTGCAGTCTCATCTTTATCAGAGTATTCCACAATTTC 325325 Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301 | || ||||| |||||||| || | |||| || | ||| ||| ||| || || Sbjct 325326 ACAACATAAATTGGAAGACTTAATCACACCGAGGTTCTTTTGATTACTCTTGCTGTTACA 325385 Query 94302 GGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTCGATACGTGC 94346 || |||||| | || ||||||| ||||||||| | |||| Sbjct 325386 GGCATCCTTGTATATCATGAAAGGTGTACCAGTTTCGGTTTGTGC 325430 >seq1 Length=1375271 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || |||||||||||||| || || || || || | | |||||||||||| |||||| Sbjct 106276 CCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTCAATG 106217 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGTTCCACA 94910 ||| |||| | ||| |||||| || || | | ||| || |||| || || Sbjct 106216 GAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTG-GAGTACCTGC 106158 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC---GACATGAGATCATATGT 94967 ||| || || || || ||||||||| | ||||| |||| ||||| | || || || Sbjct 106157 ATTGAAAAGAGTTGGAGAAGCATGGATGAAATA---CCTCAATGACATCAAATTGTAAGT 106101 Query 94968 TTCAATGACAGATTTGATGTCTGATCCGTGAATGCC 95003 ||| || |||||||||| ||| || ||||| || Sbjct 106100 TTCGATCGCAGATTTGATATCTTCACCATGAATACC 106065 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94182 TGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTC 94241 |||||||||||| ||||| || ||||||||||| ||| ||| ||| | || ||||| Sbjct 106886 TGCGATAGAAGCTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTC 106827 Query 94242 AGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGAT 94301 | || ||||| ||||| || || | || | || | ||||||| |||| ||| Sbjct 106826 ACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACA 106767 Query 94302 GGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 | ||||||| || || ||||||| |||||||| Sbjct 106766 TGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTC 106731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581210610100