Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq6 187 2e-42 >seq6 Length=912967 Score = 187 bits (206), Expect = 2e-42 Identities = 578/885 (65%), Gaps = 11/885 (1%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 || ||||| ||| ||||||||| ||||| || ||||| ||||| | || || || || Sbjct 170667 TTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTACCGGCTAGAGAGATGTTC 170726 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| |||||||| ||||| || | ||| ||| ||| || | | | Sbjct 170727 TCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCATTACCAAGAGCCACCAGA 170786 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 | ||| ||||||| |||||| | |||||| ||||| | ||||| || | || Sbjct 170787 AGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCGGCGTTCATGCCCAGCAGA 170846 Query 13549 TTTACAGGAATTATATTAGTTAAAAAT-TCTTTT-TCTATAGACACAGCCTCGTTTATAA 13606 || || | || || ||| | ||| || || || || ||||| || | || | Sbjct 170847 GCCACGGGGAGAGCATC--TTCAAAGTATCTCTTCTCAATTGATACAGCTTCAGTAATGA 170904 Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666 | | | | |||||| | || | || | ||| || | || ||| |||| Sbjct 170905 TTCTTTCCACAATGTCTGGACTTGGTCTGTTCTTCAAATGGGCGAATAATAGACAAGCAA 170964 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 |||| || | || || ||||||| || | ||| || || || ||||| ||||||| Sbjct 170965 AATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAAACCTGGCA 171024 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 | | || || || |||||||| || ||||| |||||||| || ||||| | || | Sbjct 171025 TTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAAAACACCTT 171084 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845 | ||||| ||||| || | || || ||| || | || | | || |||| ||||| Sbjct 171085 CCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTGA-ATCCAC 171143 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 | | |||||||| | |||| || || || |||| |||||||| |||||| Sbjct 171144 CTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATTAAATAAA 171203 Query 13906 TGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 13965 ||| | || | ||| | | |||| |||||||| | || ||| ||||||| Sbjct 171204 AATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGTTTCAGAA 171263 Query 13966 TGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14025 || || ||||| || ||||| || || || || || |||| || | ||| ||| Sbjct 171264 TGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTATTTGGACC 171323 Query 14026 TCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084 || | || |||| | || |||| || ||||||||||||||||| |||||||| || Sbjct 171324 TCAGCAGAGAAAT-TCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGCAAAGAA 171382 Query 14085 TGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGC 14141 || | | || ||| || || || ||||| | | || |||||||| | Sbjct 171383 CGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATTATTCCAATCATC 171442 Query 14142 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14201 |||||||| || | ||| | ||| ||| |||||||||| || | ||| | || || Sbjct 171443 CAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTCTCTTGTA 171502 Query 14202 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246 | ||| ||||| | |||| || || |||| |||||||| Sbjct 171503 AGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCT 171547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587483880800