Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq25 86.0 5e-12 seq12 86.0 5e-12 >seq25 Length=339617 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 |||||||| ||||| || | ||| ||| || || | |||||||| |||| || | Sbjct 149863 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 149922 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 |||| |||||||| || || ||||||||||||| |||||| || | || | |||||| Sbjct 149923 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 149982 Query 43012 TTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070 || || ||| || ||| || | | | || || || || || || | || Sbjct 149983 TTGTC-CTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGT 150041 Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || || | ||||||||||| |||||||| Sbjct 150042 GATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 >seq12 Length=625618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||||| ||||| || | ||| |||||||| | |||||||||||| Sbjct 512620 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 512561 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||| ||||||| ||||| || | || Sbjct 512560 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 512501 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 | |||||| || || |||| | || | ||||| || ||| ||||| | ||| Sbjct 512500 ATACCTTCCTTGTC-CTGA--ATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCG 512444 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAA 43101 || |||| || || || || || || | ||| || |||||| Sbjct 512443 ACCTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 512402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368577452760