Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 136 6e-27 seq15 118 2e-21 >seq6 Length=912967 Score = 136 bits (150), Expect = 6e-27 Identities = 386/592 (65%), Gaps = 6/592 (1%) Strand=Plus/Minus Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043 |||||||| || || ||||| | |||||||| |||||| || ||||| | || Sbjct 171549 GTAGATTTGTTCTTTTCCCCATTAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAG 171490 Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 | || || |||||||| | ||||| ||||| | || ||||| || | |||||| | | Sbjct 171489 AAGCATCATTTTGGACAGCTGAAGAAATCGATTTATCGAAGGATTTGGATGATTGGAATA 171430 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 | ||| |||| ||| || | || || || | | || |||||||| | | Sbjct 171429 ATAAGATGAGTGAAGGTGAAAGATATTTCATTTCAAGAGTCCTAGCGTTCTTTGCAGCAT 171370 Query 125164 CCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAG 125223 ||||||| || || || || ||| || || |||||| ||| | || || | Sbjct 171369 CCGATGGTATTGTTAATGAGAATTTGGTGGAGAATTTCTCTGCTGAGGTCCAAATACCGG 171310 Query 125224 AGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACT 125283 ||| |||||| ||||| ||||| || ||||| || || | || || |||| || | Sbjct 171309 AGGCTAAGTGCTTCTACGGGTTCCAGATTATGATGGAAAATATCCATTCTGAAACTTATT 171250 Query 125284 CTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACG 125340 | | ||||||| | |||| | | ||| | | || || || | | ||||| | Sbjct 171249 CGCTATTGATTGATACCTACAGTAGAGATACCGAGGAAAGTGAAT---TTTTATTTAATG 171193 Query 125341 CAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATG 125400 |||| || | | || | || ||||||| |||||| ||| ||||||| | | Sbjct 171192 CAATTGAAAACATTCCACCAATCAAGGAAAAGGCAGAATGGGCAATTAGGTGGATTCAAG 171133 Query 125401 ACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 |||| | | || || || ||| | ||||| || ||||| || || || | |||| Sbjct 171132 ACGATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCGCAGTGGAAGGTGTTTTCT 171073 Query 125461 TTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 | ||||| ||||| |||||||||||| | |||||| || || ||||| || | | Sbjct 171072 TCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTAATGCCAGGTTTAA 171013 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | | ||| || || || | | ||||||| || | ||| || ||||| Sbjct 171012 CTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACAGATTTTGC 170961 >seq15 Length=608780 Score = 118 bits (130), Expect = 2e-21 Identities = 241/352 (68%), Gaps = 6/352 (2%) Strand=Plus/Minus Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 |||||| ||||| |||||||||||||| || ||| | ||||| |||| ||||||| | Sbjct 279332 GTGCTTCTACGGGTTCCAAATCATGATGGAAAACATCCACTCTGAAACGTACTCTTTGTT 279273 Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACATGC--TCTTTAACGCAATCGAC 125348 |||||| | |||| | | || | ||| | | | || | ||||| || || || Sbjct 279272 GATTGATACCTACAGTAGGGACTC-CAAGG-AGGCTGATTTCTTATTTAATGCCATTGAA 279215 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC-AA 125407 | | || | || | ||||||| |||||| ||| ||||||| | || || || Sbjct 279214 AACATCCCACCAATCAGAGAAAAGGCAGAATGGGCCATTAGGTGGATTCAAGATGAAGAA 279155 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | || || || ||| | || ||||| ||||| || || || |||||||| || || Sbjct 279154 GCCCTT-TATGCTGAAAGATTAGTCGCATTTGCCGCAGTTGAAGGTATCTTCTTCTCAGG 279096 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 ||| || |||||||||||| | |||||| || || ||||| || || || | Sbjct 279095 GTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTGATGCCAGGTCTAACCTTCTC 279036 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTA 125579 |||||| || || | ||||||| || | || ||||||||| |||| Sbjct 279035 TAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGACTTTGCCTGTCTA 278984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057162087200