Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq12 114 9e-21 seq3 87.8 1e-12 seq17 82.4 5e-11 >seq12 Length=625618 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| | |||||| |||||||| || || ||| ||||| || ||||||||| Sbjct 614859 ACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGA 614918 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| || | |||||| |||||||| || | | ||||||||| | || Sbjct 614919 TAAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGG 614978 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||||||| ||| ||| ||||| | | | ||||| | | ||||| Sbjct 614979 AATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCAC 615038 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| | |||||| || || || ||||| Sbjct 615039 TTCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| | |||||| |||||||| || || ||| |||||||| ||||||||| Sbjct 615752 ACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGA 615811 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || |||| ||| || || ||||| || || | ||| ||||| |||| Sbjct 615812 TAAAGTCCTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGG 615871 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||||||| ||| ||| ||||| | ||| ||||| | | || || Sbjct 615872 AATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAAC 615931 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| |||| |||||| || || || ||||| Sbjct 615932 CTCCAAGGTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 615979 >seq3 Length=965618 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||||| ||||| || | ||| || ||||| || || || ||| Sbjct 656577 ACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 656636 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 656637 CAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 656696 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||| || || || ||| || ||||| | ||| ||| || | | || || Sbjct 656697 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 656756 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || |||||||| ||||| || ||||| Sbjct 656757 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 656804 >seq17 Length=530849 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| | ||||| || | ||| || ||||| || || || ||| Sbjct 311537 ACCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 311478 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 311477 CAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 311418 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || || ||| || ||||| | | | ||| || | | || || Sbjct 311417 GATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAAC 311358 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || |||||||| ||||| || ||||| Sbjct 311357 CTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776648752560