Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq6 170 2e-37 seq15 125 6e-24 >seq6 Length=912967 Score = 170 bits (188), Expect = 2e-37 Identities = 597/916 (65%), Gaps = 37/916 (4%) Strand=Plus/Plus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| || ||||| || ||||||||| ||||| || || || || Sbjct 170649 TTTGACATGACACCAGCCTTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTA 170708 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || || |||||||| ||||| || ||| || ||||||||| | | Sbjct 170709 CCGGCTAGAGAGATGTTCTCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCA 170768 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | | | |||||||||||||||||| | ||| || ||||||| | Sbjct 170769 TTACCAAGAGCCACCAGAAGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCG 170828 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | || || || Sbjct 170829 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTCTCAATTGAT 170888 Query 13082 ACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTA 13141 || ||||| ||| || |||| || | ||| ||| ||| | | ||| Sbjct 170889 ACAGCTTCAGTAATGAT---TCTTTCCACAATGTCT------GGACTTGGTCTGTTCTTC 170939 Query 13142 AAC-------ATCATA--CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || ||| || |||||||| |||||| ||||| ||||||| || | Sbjct 170940 AAATGGGCGAATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAAT 170999 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 || || || || |||| ||| ||||| || |||| || || || |||||| || ||||| Sbjct 171000 TCATTAGAGAAAGTTAAACCTGGCATTAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGC 171058 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 ||| || ||||| || || | ||||| ||||| ||||| || | || |||||| |||| Sbjct 171059 AAATGATCCCGAGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATA 171118 Query 13312 C---GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCA 13368 | | ||| | || | |||||| | | ||||| | ||| |||| || | Sbjct 171119 AAGGGCAGTATCGT--CT-TGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGG 171175 Query 13369 GTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428 || ||||| ||||| ||||||||| | | |||||| | ||| | | || || Sbjct 171176 TGGAATGTTTTCAATTGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGT 171235 Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488 ||| ||||||| ||| |||| ||||| |||||||||||| || ||||| || || Sbjct 171236 ATCAATCAATAGCGAATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTA 171295 Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGT 13547 || || ||||||| | || || || || | || |||| | || | || || || | Sbjct 171296 GAAGCACTTAGCCTCCGGTATTTGGACCTCAGCAGAGAAAT-TCTCCACCAAATTCTCAT 171354 Query 13548 TAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttC 13605 |||| || || || || ||||| || || || | ||| ||| || | | |||| Sbjct 171355 TAACAATACCATCGGATGCTGCAAAGAACGCTAGGA--CTCTTGAAATGAAATATCTTTC 171412 Query 13606 GTTTTCTGACAACT--TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 ||| || || ||| |||||| ||||| || |||||||| | || ||| | Sbjct 171413 ACCTTCACTCATCTTATTATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGC 171472 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCAT-CCATATATCCTTATAAACAATGG 13721 |||||||| || || | || |||| || | | | ||| || || | ||| ||||| Sbjct 171473 TGTCCAAAATGATGCTTCTGCTCTCTTGTA-AGCTTGCCAAATTTCATGATATTTAATGG 171531 Query 13722 GAAACACAACGTATCT 13737 | || | ||| |||| Sbjct 171532 GGAAAAGAACAAATCT 171547 >seq15 Length=608780 Score = 125 bits (138), Expect = 6e-24 Identities = 481/746 (64%), Gaps = 12/746 (2%) Strand=Plus/Plus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| ||||| || ||| ||||| || ||||| || || || || Sbjct 278679 TTTGACATGACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTA 278738 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || ||||||||||| ||||| |||||| | | ||||| |||| Sbjct 278739 CCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTTTCG 278798 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | || | |||||| ||||| || || | ||| || ||||||| | Sbjct 278799 TTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGCG 278858 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | ||||| || | Sbjct 278859 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTTTCAATTGAA 278918 Query 13082 ACTGCTTCGATAACTATGTCT--CTTATTACGTTCTCTAATGGAGGATTTGATAGA--TG 13137 || ||||| ||| || | | | | || ||| | | | | | |||| | || Sbjct 278919 ACAGCTTCAGTAATAATCTTTTCCACAATA---TCTGGACTTG-GTCTGTGATTCAAGTG 278974 Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197 || | | ||| ||||| || ||||| ||||| ||||| | || | ||||| Sbjct 278975 AGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTT 279034 Query 13198 TGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256 || || |||||||| ||||| || |||| || || || |||||| || ||||| || | Sbjct 279035 AGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGCGAAAG 279093 Query 13257 AACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCAT-ACGTA 13315 | || || || || || ||||||||||| ||||| || | || |||||| ||| | | Sbjct 279094 ACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGG 279153 Query 13316 CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375 || | || | | |||||| | ||||||| | ||| |||| | | | || Sbjct 279154 CT-TCTTCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATG 279212 Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435 ||||| || || |||||||| ||| ||||| ||| | | || ||||| ||| Sbjct 279213 TTTTCAATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATC 279272 Query 13436 AATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACAT 13495 || || ||| |||| || || || ||||||||| |||||||| || || || || Sbjct 279273 AACAAAGAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCAC 279332 Query 13496 CTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATC 13555 | || || | | || ||||||| | || | || | || || || || || || Sbjct 279333 TTGGCTTCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATA 279392 Query 13556 CCGTCACTAGCAGCaaaaaaaGCAAG 13581 ||||| ||||| || || || || Sbjct 279393 CCGTCGGATGCAGCGAAGAACGCTAG 279418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981244428440