Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq24 107 3e-19 seq15 107 3e-19 seq27 105 1e-18 >seq24 Length=372987 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||||||||| ||||| ||||| ||||||||||| Sbjct 77170 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 77228 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | | ||||| || |||||| ||||||| ||| |||| ||||| | Sbjct 77229 TAGAAGATTAGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 77288 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| | |||| || | | | ||||| ||||| | |||||| || Sbjct 77289 GAGAGCTGTTCTAAAGACATTTTTGGAATCTGTTATTAGAGATGCAGTTACCTATACTGA 77348 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| || |||| |||| || || | || | || || Sbjct 77349 ACACGCAAAGAGAAAGACAGTCACTTCGCTGGACGTCGTGTACGCTCTAAAGAGACAGGG 77408 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | ||||||||||||| ||||| Sbjct 77409 TAGAACCCTTTATGGTTTTGGTGGTTAA 77436 Score = 102 bits (112), Expect = 1e-17 Identities = 185/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||||||||| ||||| ||||| ||||| ||||| Sbjct 292654 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCTGCTAT 292596 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | | ||||| || |||||| ||||||| ||| |||| ||||| | Sbjct 292595 TAGAAGATTAGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 292536 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | |||| ||| | | |||||||| |||||| | || || || Sbjct 292535 GAGAGCCGTCCTAAAGACGTTCTTAGAATCCGTTATCAGGGATGCTGTTACTTACACTGA 292476 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || || ||||| | ||||| || | || | ||||| Sbjct 292475 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTACGCTCTAAAGAGACAAGG 292416 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||||| || ||||| Sbjct 292415 TAGAACCCTTTATGGTTTCGGTGGTTAA 292388 >seq15 Length=608780 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| | | |||||||||| ||||| ||||| || ||||| || Sbjct 159217 GCTAAGCGTCACAGAAAGAT-TTTAAGAGATAACATTCAAGGTATCACAAAACCAGCCAT 159275 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | || | | ||||| ||||||||| ||||||| ||| |||| ||||| | Sbjct 159276 CAGAAGATTAGCAAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 159335 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| |||||| ||| | || | || || ||||| | |||||| || Sbjct 159336 GAGAGCTGTTCTGAAGACCTTTTTGGAGTCTGTCATTAGAGATGCAGTTACCTATACTGA 159395 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| ||||| || |||| |||| || || | || | || || Sbjct 159396 ACACGCAAAGAGAAAGACAGTCACTTCGCTGGACGTCGTGTACGCTCTAAAGAGACAGGG 159455 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | ||||||||||||| ||||| Sbjct 159456 TAGAACCCTTTATGGTTTTGGTGGTTAA 159483 >seq27 Length=227066 Score = 105 bits (116), Expect = 1e-18 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||| || |||||||| | | |||| | | ||||| | Sbjct 147633 GAGATAACATTCAAGGTATCACTAAACCAGCTATTAGAAGATTGGCAAGAAGAGGTGGTG 147574 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| ||||||| ||| |||||||||| | | | ||| ||||||| ||| | Sbjct 147573 TTAAGCGTATCTCTGGTTTGATCTATGAAGAAGTGAGAGCTGTCTTGAAGACGTTCTTGG 147514 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || ||| |||||| | || || ||||||||||| | ||||| || || | Sbjct 147513 AATCTGTCATCAGGGATGCTGTTACTTACACTGAGCACGCTAAGAGAAAGACCGTTACTT 147454 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | ||||| | ||||| || | || | ||||| | | |||| ||||| || ||| Sbjct 147453 CTTTGGATGTTGTCTACGCTCTAAAGAGACAAGGTAGAACCCTTTACGGTTTCGGTGGTT 147394 Query 16698 A 16698 | Sbjct 147393 A 147393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074998852460