Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 seq15 125 8e-24 >seq6 Length=912967 Score = 143 bits (158), Expect = 3e-29 Identities = 350/532 (66%), Gaps = 17/532 (3%) Strand=Plus/Plus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| |||||||| ||||||||||| || |||| || ||||||||||| || ||||| Sbjct 170957 ACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAA 171016 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 ||| ||||||| || |||| || |||||||| || | ||||||| ||| || ||||| Sbjct 171017 ACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAA 171076 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTA------TGTAGATTCTTT 21648 || || || || || ||||| || ||||||| |||| | || ||| |||| Sbjct 171077 AACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTG 171136 Query 21649 ATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAAT 21708 | ||||| | |||||||| ||||||||| || || ||| | ||||| Sbjct 171137 A------ATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAAT 171190 Query 21709 AGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACT 21768 || || || | | | |||| || ||| | || Sbjct 171191 TGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGA 171250 Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828 ||| |||||||||| |||||||| ||| ||||| || ||||| || || | ||||| Sbjct 171251 ATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTC 171310 Query 21829 TGAACATTGAACCTCGGAATA-AAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCAC 21887 | ||| ||||| | | | |||| | | |||| || ||||| || || ||||| Sbjct 171311 CGGTATTTGGACCTCAGCAGAGAAATTCTCCA-CCAAATTCTCATTAACAATACCATCGG 171369 Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTT--CGTTATCTGTTAAT-T 21944 || ||||| || || | | || || ||||||| || | || || | | | Sbjct 171370 ATGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT 171429 Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 | |||||||| ||||| || |||||||| | |||||||| ||||||||| Sbjct 171430 TATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAA 171481 >seq15 Length=608780 Score = 125 bits (138), Expect = 8e-24 Identities = 346/524 (66%), Gaps = 10/524 (2%) Strand=Plus/Plus Query 21167 TTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTT 21226 |||||||| | || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 278679 TTTGACATGACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTA 278738 Query 21227 CCTTCCAATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATT 21285 || | | || || ||||||||| || ||||||||| | | ||| | || ||| | Sbjct 278739 CCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTT-TC 278797 Query 21286 ACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTC 21345 ||| || | || | ||| || || || ||||| | ||||| ||||| | Sbjct 278798 GTTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGC 278857 Query 21346 ACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGAT-TTTTCTATAG 21404 ||||| || | || || || ||||| | | ||||| | | ||||| || | Sbjct 278858 GGCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCT-TCAAAGTATCTCTTTTCAATTG 278916 Query 21405 AGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG---GGGATACAATAATT 21461 | || |||||| ||| || ||| | || || ||| || | ||| ||| | Sbjct 278917 AAACAGCTTCAGTAATAATCTTTTCCACAATATCTGGACTTGGTCTGTGATTCAAG---T 278973 Query 21462 GTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCAT 21521 | || | | ||| ||||| || |||||||||||| || || | || ||||| | Sbjct 278974 GAGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGT 279033 Query 21522 TAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG 21581 |||| || |||| ||| ||||| | || |||| || |||||||| || | || || | Sbjct 279034 TAGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAG 279093 Query 21582 CTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641 ||||| ||||| || || ||||| || |||||||| ||||||| |||| | || | Sbjct 279094 ACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGG 279153 Query 21642 ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCT 21685 ||||| ||| ||||| | ||||||| |||||||||| Sbjct 279154 CTTCTTCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCT 279197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899337272800