Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 8e-16 seq25 89.7 4e-13 seq12 89.7 4e-13 seq17 86.0 5e-12 >seq3 Length=965618 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| ||||| |||||||| ||||||||||||| || |||| | | Sbjct 656590 CTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCA 656649 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| | || | | |||||||| || | ||||| ||| Sbjct 656650 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTG 656709 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| | || ||| | ||| ||| Sbjct 656710 TCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATG 656769 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || || |||| || ||||||||||||||||| ||| Sbjct 656770 GTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTTG 656808 >seq25 Length=339617 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| || | |||| ||||| || ||||| || || |||||||| || | | Sbjct 149854 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 149913 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||||||| || || ||| |||| | | ||||||||| ||| Sbjct 149914 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 149973 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||||| || || | | | ||| || | ||| | Sbjct 149974 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 150033 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 150034 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 >seq12 Length=625618 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| || | |||| |||||| || ||||||||||| ||||| || |||| Sbjct 614860 CCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGAT 614919 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | |||||| || ||| | || || | || ||||| || Sbjct 614920 AAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGA 614979 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || ||||| || ||| | ||| || | | | | || ||| | ||| | Sbjct 614980 ATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCACT 615039 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct 615040 TCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 >seq17 Length=530849 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| ||||| |||||||| ||||||||||||| || |||| | | Sbjct 311524 CTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCA 311465 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| | || | | |||||||| || | || || ||| Sbjct 311464 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 311405 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| | || || | ||| ||| Sbjct 311404 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAATG 311345 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| || ||||||||||||||||| Sbjct 311344 GTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086913857800