Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq25 158 1e-33 seq12 138 1e-27 seq17 132 4e-26 seq3 132 4e-26 >seq25 Length=339617 Score = 158 bits (174), Expect = 1e-33 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| |||||| ||||||| | |||||||| || ||| Sbjct 150080 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 150021 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || |||||||| | | | || | |||| ||| ||||| ||||| ||||| ||||||| Sbjct 150020 GATACTATCGA-TAATGTTAAATCTAAAATTCAG-GACAAGGAAGGTATTCCTCCTGACC 149963 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | |||||||| || || ||||| ||||| | | | ||| || ||||||| Sbjct 149962 AACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACA 149903 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 | || || ||||| || || || || || || |||| |||||||| ||| Sbjct 149902 ACATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 149853 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | || || || || ||| Sbjct 150536 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 150477 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| ||| ||| ||||| ||||| ||||| || |||||| Sbjct 150476 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 150417 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || || ||| | ||||| | | | ||| || |||||||| Sbjct 150416 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 150357 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || || || || | || ||||||| || Sbjct 150356 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 150310 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | || || || || |||||||| || Sbjct 40984 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 41043 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| |||| | ||| ||||| ||||| || |||||||||||||| | | Sbjct 41044 GACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 41102 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || || || ||||| ||||||| | | || || || ||||| || ||||| Sbjct 41103 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 41162 Query 25187 AGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | || || || ||||| | ||||| || Sbjct 41163 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 41201 >seq12 Length=625618 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| ||||||||||| | ||||| | |||||||| || || Sbjct 615086 ATGCAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCC 615027 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| |||| | ||| || |||||||| |||||||||||||| Sbjct 615026 GATACCATCGACAACGTCAAGTCAAAGATTCAG-GATAAAGAAGGTATTCCACCTGACCA 614968 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || ||||| || |||||| |||| |||| | | ||| | |||||| || Sbjct 614967 GCAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATAA 614908 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || || || ||||| || |||| |||||||| || Sbjct 614907 CATCCAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGAGGTGG 614860 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||||||||| ||||| ||||||| | || || || || |||||||| || Sbjct 512403 TTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATT 512462 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| |||| | ||| ||||| ||||| || |||||||||||||| | | Sbjct 512463 GACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 512521 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || ||||| || || ||||| ||||||| | | || || ||||||||| || ||||| Sbjct 512522 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAA 512581 Query 25187 AGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | || || || ||||| | ||||| || Sbjct 512582 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 512620 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || |||||| | ||||| | || ||||| || ||| Sbjct 614858 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 614799 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||| ||||| |||||||||||||| Sbjct 614798 GACACCATCGACAACGTTAAGTCAAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 614740 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || ||||| || || ||| |||| |||| | | || | || || || Sbjct 614739 GCAAAGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAA 614680 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || |||| || || |||| |||||||| || Sbjct 614679 CATTCAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGAGGTGG 614632 Score = 98.7 bits (108), Expect = 9e-16 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || |||||| | ||||| | || ||||| || ||| Sbjct 615751 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 615692 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||| ||||| |||||||||||||| Sbjct 615691 GACACCATCGACAACGTTAAGTCAAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 615633 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 || | | || ||||| || || ||| |||| |||| Sbjct 615632 GCAAAGACTAATCTTTGCGGGTAAGCAACTAGAGGATG 615595 >seq17 Length=530849 Score = 132 bits (146), Expect = 4e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | || || || || ||| Sbjct 311310 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 311369 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| ||||| || ||||||||| Sbjct 311370 GACACTATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGTATCCCACCTGAC 311426 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || || ||| ||| Sbjct 311427 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 311486 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| | || || || || || | ||||| || Sbjct 311487 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGG 311536 >seq3 Length=965618 Score = 132 bits (146), Expect = 4e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | ||||| || || ||| Sbjct 656804 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCT 656745 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||| | || | ||| ||||| || || || ||||||||| Sbjct 656744 GACACTATTGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCACCTGAC 656688 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || || ||||| ||||||| | | || || ||| ||| Sbjct 656687 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 656628 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| | || || || ||||| | ||||| || Sbjct 656627 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 656578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326838139300