Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq12 152 4e-32 seq3 132 4e-26 seq25 131 1e-25 seq15 91.5 1e-13 seq6 84.2 2e-11 >seq12 Length=625618 Score = 152 bits (168), Expect = 4e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| |||| |||||||| ||||| | || |||||| || | Sbjct 614858 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 614799 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| |||||||||||||| ||||||||||| || || Sbjct 614798 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 614739 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || || || |||||||| | ||| | || || || ||| Sbjct 614738 CAAAGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 614679 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||||||| ||||| ||| |||| || ||||| Sbjct 614678 ATTCAAAAGGAATCTACCTTACACTTGGTTTT 614647 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | |||||||||||| ||||||| ||||||||| | || Sbjct 615086 ATGCAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCC 615027 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||| ||||| || || || ||||||||||| || || Sbjct 615026 GATACCATCGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACCAG 614967 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || ||||| |||||||| | || | |||||||| ||| Sbjct 614966 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATAAC 614907 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || ||||| || || || | ||||| ||||| Sbjct 614906 ATCCAAAAGGAGTCTACTCTGCATTTGGTTTT 614875 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| |||| |||||||| ||||| | || |||||| || | Sbjct 615751 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 615692 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| |||||||||||||| ||||||||||| || || Sbjct 615691 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 615632 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || || || |||||||| | ||| | || || || ||| Sbjct 615631 CAAAGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 615572 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||| ||| Sbjct 615571 ATCCAGAAGGAATCTACC 615554 Score = 122 bits (134), Expect = 7e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || ||||| || ||||| || ||||||| || || ||| || | || ||| | Sbjct 512402 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCAT 512461 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| ||| ||||| |||||||| ||||| ||||| || |||||| | | Sbjct 512462 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 512521 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || || ||| | || | |||||||||||||| ||||| Sbjct 512522 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAA 512581 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || | || || ||| | ||||| | || ||| Sbjct 512582 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 512621 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| ||| |||| ||||| || | || | || || ||| | || Sbjct 615979 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 615920 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||| ||||| || || || |||||||| || || ||| Sbjct 615919 GATACCATTGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAA 615860 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || | || || | || | |||||||| ||| Sbjct 615859 CAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAAC 615800 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||||||| || || || | ||||| ||||| Sbjct 615799 ATTCAAAAGGAGTCTACTCTGCATTTGGTTTT 615768 >seq3 Length=965618 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| || ||||| || ||||| || | || || ||||| ||| | Sbjct 656807 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 656748 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || ||||| |||||||||||||| ||||| || Sbjct 656747 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 656688 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | ||| | ||||| ||| Sbjct 656687 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 656628 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||||||| | || || || | ||||| | || ||| Sbjct 656627 AACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGGT 656577 >seq25 Length=339617 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||| |||| |||||||| ||||| | ||||| || | || Sbjct 150308 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 150249 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||| ||||| || |||||||||||||| || || ||| Sbjct 150248 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 150189 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || || || | |||||| | | ||| | || ||||||||| Sbjct 150188 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 150129 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 150128 ATCCAGAAGGAATCTAC 150112 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| || || |||||||| ||||| | ||||||||| | | Sbjct 150080 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 150021 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| |||||||| |||||||| |||||||| || || ||| Sbjct 150020 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 149961 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || || || || | || | || ||||||||| Sbjct 149960 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 149901 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || || ||||| || || | || || ||||| Sbjct 149900 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTT 149869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| ||||| || ||||| || | || | || || ||| | | Sbjct 150536 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 150477 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||| || |||||||| || |||||||| || || ||| Sbjct 150476 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 150417 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || | || || | || | || ||||||||| Sbjct 150416 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 150357 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || || || |||||||| | || || || ||| |||| Sbjct 150356 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATT 150319 >seq15 Length=608780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 117067 TCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTA 117126 |||| || ||| || ||||| || ||||| ||||| ||| |||||||| |||| Sbjct 279132 TCGCATTTGCCGCAGTTGAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGT 279073 Query 117127 TCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACG 117186 | |||| || ||||| ||||| |||||||| || |||||||| || | | |||| Sbjct 279072 TGAAGAAGAAGGGTCTGATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACG 279013 Query 117187 AAGGTTTACACACCGATTTTGCGTG 117211 ||||||| || ||||| ||||| || Sbjct 279012 AAGGTTTGCATACCGACTTTGCCTG 278988 >seq6 Length=912967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 117081 GTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGGT 117140 || ||||| ||||||| || || ||||||||||| |||| | |||| || ||| Sbjct 171088 GTGGAAGGTGTTTTCTTCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGT 171029 Query 117141 CTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACACC 117200 |||||||| ||| |||| || || ||||| || | | ||||||||||| ||||| Sbjct 171028 CTAATGCCAGGTTTAACTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACA 170969 Query 117201 GATTTTGCGTG 117211 |||||||| || Sbjct 170968 GATTTTGCTTG 170958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726874604300