Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 120 3e-22 seq25 100 3e-16 seq17 84.2 2e-11 >seq12 Length=625618 Score = 120 bits (132), Expect = 3e-22 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || |||| | | || |||||||||||||| ||||| | || | ||| Sbjct 614647 AAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCC 614706 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||| | | ||||||| | || ||||| || || |||||||| ||||| Sbjct 614707 TCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCT 614766 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| |||| |||| | | |||||| | || |||||||| | || | | Sbjct 614767 -TGAATCTTTGACTTAACGTTGT-CGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAG 614824 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||||| |||||||| ||||| || ||||| Sbjct 614825 TTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 120 bits (132), Expect = 3e-22 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| ||||| | | ||||||||||| ||||| || ||| | ||| | ||| Sbjct 614875 AAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTCCTACCATCC 614934 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||||||||| | | ||||||| | || ||||| || || ||||||||||| || Sbjct 614935 TCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCTTTATC- 614993 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| || | ||| || | ||| |||| || ||||| || | || | || Sbjct 614994 CTGAATCTTTGACTTGACGTTG-TCGATGGTATCGGAAGATTCCACTTCCAGAGTGATCG 615052 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| |||||||| || || ||||||||||| Sbjct 615053 TTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 120 bits (132), Expect = 3e-22 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| ||||| | | ||||||||||||||||| || ||| | ||| | ||| Sbjct 615768 AAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCT 615827 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||||| | |||||| | |||||||| ||||| ||||||||||| || Sbjct 615828 TCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATC- 615886 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| || | ||| || | ||| |||| || || ||||| | || | | Sbjct 615887 CTGAATCTTTGACTTGACGTTG-TCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAG 615945 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||||||| ||||| || || ||||||||||| Sbjct 615946 TCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 615979 Score = 102 bits (112), Expect = 8e-17 Identities = 119/157 (76%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| ||||| ||||| | | ||||||| | || ||||| || || |||||||| ||| Sbjct 615597 TCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTG 615656 Query 138520 TCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 || ||| | |||| |||| |||| | | |||||| | || |||||||| | || | Sbjct 615657 TCT-TGAATCTTTGACTTAACGTTGT-CGATGGTGTCAGAGGATTCCACCTCTAAAGTGA 615714 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| |||||||| ||||| || ||||| Sbjct 615715 TAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 615751 >seq25 Length=339617 Score = 100 bits (110), Expect = 3e-16 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 || ||||| || |||||||| || || || | || | ||||| ||||| ||||| | Sbjct 150115 GATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCA-TCCTCAAGTTGCTTACCAGC 150173 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | ||||||| | |||||||| ||||| ||||| || || || ||| | |||| || | Sbjct 150174 AAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC-TGAATCTTTGACTTGA 150232 Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| | | |||||||| ||||| || || | || | ||||||||||| ||||| Sbjct 150233 CGTTGT-CGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTC 150291 Query 138598 TTTACAAAAATCTGCAT 138614 || || ||||| ||||| Sbjct 150292 TTGACGAAAATTTGCAT 150308 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | || ||||| || |||||||| || | Sbjct 150310 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 150369 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || || | | | || | | ||||||||||||||| Sbjct 150370 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGA 150429 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| || | |||| |||| ||| || | ||| || | || || | Sbjct 150430 ATACCTTCGTTGTC-TTGGATCTTTGACTTAACGTTG-TCGATGGTATCAGAAGATTCAA 150487 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || |||||||||| ||| || || ||||||||||| Sbjct 150488 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || || | | ||||| || || |||||||| || || ||| | ||| Sbjct 149869 AAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCT 149928 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||| | | | || | | ||||||||| ||||| |||||||| ||||| Sbjct 149929 TCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCC 149988 Query 138523 GTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | || | || || | || ||||| || | || | || Sbjct 149989 -TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGT 150047 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| ||||| ||||| || ||||| Sbjct 150048 TTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 >seq17 Length=530849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | || || || | | | || |||||||| |||||||||||| | Sbjct 311536 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 311477 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | ||| ||||| | | |||| | | |||||||| || || Sbjct 311476 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 311417 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || |||| || | ||||| | || || | Sbjct 311416 ATACCTTCCTTGTC-CTGAATCTTGGACTTGACATTG-TCGATAGTGTCAGAAGATTCAA 311359 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || ||||| |||| ||| || |||||||||||||| Sbjct 311358 CCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261035278400