Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 seq1 89.7 8e-13 >seq3 Length=965618 Score = 114 bits (126), Expect = 2e-20 Identities = 305/461 (66%), Gaps = 4/461 (1%) Strand=Plus/Plus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| |||||||| || ||||| || ||||||| ||| || || | |||||| | Sbjct 324380 TTCTCAAGTAGTACATACCCGTCTTGAGACCCTTCTTCCAACCATAGAAGTGCATACTTG 324439 Query 203940 ACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGA 203999 || ||| | || | || || |||||| ||||||| || || ||| ||||||| Sbjct 324440 TCAATTTACCCATTGTAGGAGCGCGCATGTGGATGTTCAAGGAATGCGATTGATCGATGA 324499 Query 204000 AAGGCGCCCGATCTGCGGCCATATTGATAATG-GTCTTCTGCGAAATCTCCCACACCGTC 204058 | | ||||| |||||||||| |||| ||||| || ||||| |||||||||||| Sbjct 324500 ACAAGGAACGATCAGCGGCCATATCAATAACATGTCTT-TGAGAAATTTCCCACACCGTC 324558 Query 204059 TTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTC 204117 ||| ||| || | | | | || || | || || | || || || || || ||||| Sbjct 324559 TTGTACAAGTTTTTAATCTCCTGTGGGATAT-TTGGAATGTTTTGAATGGAACCATTGTC 324617 Query 204118 GGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCAC 204177 | || | | | || | || |||| || || || | || ||| || Sbjct 324618 AGTAATGATTTGCTGTTTCATACTTTCATCCCAAATACCTAAGTCCACCAAATCCTTCAA 324677 Query 204178 CAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTT 204237 || || || |||| ||||| || || || ||||| || | || | | ||| ||| Sbjct 324678 CAAGTATGGATTGACAATCTGGAATTCACCAGACAGAACACGACGAGAGTACATGTTAGA 324737 Query 204238 GGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCAT 204297 ||| | |||||||| ||||||| || ||||| || | || || || ||||| Sbjct 324738 TGTGTAAGGTTCGAAACATTCGTTGTAACCCAAAATTTGTGATGTCGATGCGGTTGGCAT 324797 Query 204298 GGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGA 204338 ||||||| |||| ||||| | |||||| | || || || Sbjct 324798 AGGAGCCACCAGCAATGAGTTTCTCACACCATGTTCTTTGA 324838 >seq1 Length=1375271 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| |||||||| || ||||| || ||||||| ||| ||||| | |||||| | Sbjct 107772 TTCTCAAGTAGTACATACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATACTTG 107713 Query 203940 ACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGA 203999 | ||| | || ||||| | |||||| || |||| || || ||| || |||| Sbjct 107712 TTAATTTACCCATTGTGGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATCAATGA 107653 Query 204000 AAGGCGCCCGATCTGCGGCCATATTGATAATG-GTCTTCTGCGAAATCTCCCACACCGTC 204058 | || ||||| || ||||| | | || ||||| || ||||| |||||||||||| Sbjct 107652 ACACAGCACGATCAGCAGCCATGTCTAGAACATGTCTT-TGAGAAATTTCCCACACCGTC 107594 Query 204059 TTGAACACGTCTCTGGTGTGTTGAGG 204084 ||| ||| ||| || | | ||| || Sbjct 107593 TTGTACAAATCTTTGATTTCTTGTGG 107568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153013323200