Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq25 132 1e-25 seq12 131 4e-25 seq17 109 1e-18 seq3 100 7e-16 >seq25 Length=339617 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | ||| || |||||||||| ||||||||||| ||| || || || Sbjct 41190 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 41131 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || |||||||| | | || ||||| || || ||||| Sbjct 41130 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 41071 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| || | |||||| | | ||| || ||||| ||||| Sbjct 41070 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 41011 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 41010 GGTCTTACCAGTCAAAGTCTTGACAAAA 40983 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || ||||| ||||| || ||||| |||| |||||| |||| || || || || Sbjct 150093 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 150152 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| || || ||||| || || ||||| || | || ||||| ||| ||| || || Sbjct 150153 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 150212 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| |||| |||||| | | || || || || ||||| Sbjct 150213 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 150272 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || || |||||||| Sbjct 150273 AGTTTTACCAGTTAGAGTCTTGACGAAAATTTG 150305 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | || | ||| ||||| ||||| || |||| |||||| |||| || ||| || Sbjct 149863 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 149922 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||| ||||| || || || || | | ||| ||||| ||| ||| ||||| Sbjct 149923 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 149982 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || || || |||| || || | | ||| || ||||| ||| Sbjct 149983 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 150042 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || | ||||||||||| ||||| Sbjct 150043 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTG 150077 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || || ||||| |||||||| || || ||| || | ||||||||| |||||||| Sbjct 149951 ATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAA 149892 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||||||||| ||| | ||||| ||||| Sbjct 149891 GAGTCTACTCTGCACTTGGTTTTAAGACT 149863 >seq12 Length=625618 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| ||||||||||||| ||| || || | |||||||| ||||| || || || Sbjct 614884 TGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTCCTACCATCCTCTAGTTGT 614943 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| || | |||||||| || ||| |||||| |||||||||||| Sbjct 614944 TTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCTTTATCCTGAATCTTT 615003 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| |||| ||| || | | ||| || |||| |||||||| ||||| || Sbjct 615004 GACTTGACGTTGTCGATGGTATCGGAAGATTCCACTTCCAGAGTGATCGTTTTACCGGTC 615063 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| || Sbjct 615064 AGAGTCTTGACGAAAATCTG 615083 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| ||||||||||| | ||| || || | |||||||| || |||||||| ||| Sbjct 615777 TGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCTTCCAGTTGC 615836 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| ||||| | | || ||||| ||| ||| |||||| |||||||||||| Sbjct 615837 TTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCCTGAATCTTT 615896 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | ||| || | | ||| || ||||| || || |||||||| || Sbjct 615897 GACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTT 615956 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| || Sbjct 615957 AGAGTCTTAACGAAAATCTG 615976 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | || | ||| | || || |||||||| | ||| ||||||| || || || Sbjct 614641 AGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTA 614700 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || || ||||| || || ||||| || | |||||||| || ||| ||||| Sbjct 614701 CCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCC 614760 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||||||| ||| ||| |||| |||||| | | ||| || || || ||| Sbjct 614761 TTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTG 614820 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || |||||||||||||| ||||| Sbjct 614821 ATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTG 614855 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || ||||| |||| ||| ||||||| || || || ||||| || || ||||| || Sbjct 615555 GTAGATTCCTTCTGGATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCC 615614 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || ||||| || | |||||||| || ||| ||||| || ||||||||| ||| Sbjct 615615 GCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTA 615674 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| |||||| | | ||| || || || ||||| || ||||| || |||||| Sbjct 615675 ACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTT 615734 Query 199613 TTCACAAAAATTTG 199626 |||||||| ||||| Sbjct 615735 TTCACAAAGATTTG 615748 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | ||| || |||||||||| |||||| || | ||| || || || Sbjct 512609 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACC 512550 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 512549 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 512490 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| || | |||||| | | ||| || || | ||||| Sbjct 512489 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGAT 512430 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 512429 GGTCTTACCAGTCAAAGTCTTGACAAAA 512402 >seq17 Length=530849 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | || || |||||||||| ||||||||| | ||| || || || Sbjct 311525 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 311466 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 311465 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 311406 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| || |||| ||||| | | ||| || || | || || Sbjct 311405 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 311346 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||| || |||||||| || Sbjct 311345 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTG 311313 >seq3 Length=965618 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | || || |||||||||| ||||||||| | ||| || || || Sbjct 656589 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 656648 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || || || Sbjct 656649 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 656708 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| || || | ||||| | | ||| || || | || || Sbjct 656709 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 656768 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||| || |||||||| || Sbjct 656769 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTG 656801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918276914740