Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq12 105 4e-18 seq3 95.1 8e-15 >seq12 Length=625618 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 || ||||||||||| | || ||| || |||||||||||||| || | | ||| || Sbjct 614644 CTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCA 614703 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || || || || || ||||| ||||||| ||||||||| | || | || |||||| Sbjct 614704 TCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTG 614763 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || || || || | || || Sbjct 614764 TCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATA 614823 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || ||||| ||||||||||| |||||| Sbjct 614824 GTTTTACCAGTTAGAGTTTTCACAAAGATTTGCATA 614859 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||||||||| || | | ||| |||| || || || || || ||||| Sbjct 615560 TTCCTTCTGGATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCCGCAAA 615619 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||||| ||||||||| | || | || |||||||| |||||| || ||| Sbjct 615620 GATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTAACGTT 615679 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| || || || || | || || ||||| || || ||||| ||||| Sbjct 615680 GTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCAC 615739 Query 34970 AAAGATCTGCATA 34982 |||||| |||||| Sbjct 615740 AAAGATTTGCATA 615752 >seq3 Length=965618 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || | |||||||| | ||| ||| || || ||||| ||||| || Sbjct 656578 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 656637 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||| ||||| | || Sbjct 656638 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 656697 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| ||||| | || | ||| | ||||| Sbjct 656698 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 656757 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | ||| ||||| || ||||| | |||||| ||||| |||||||| || Sbjct 656758 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632729576160