Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 300 2e-76 seq6 288 1e-72 seq8 212 7e-50 seq15 208 9e-49 seq3 203 4e-47 seq2 194 2e-44 >seq1 Length=1375271 Score = 300 bits (332), Expect = 2e-76 Identities = 1166/1834 (64%), Gaps = 57/1834 (3%) Strand=Plus/Minus Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068 || ||||| || || |||||||||||||| | ||| |||| || ||||| ||||| Sbjct 107777 TTGTGTTCTCAAGTAGTACATACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCAT 107718 Query 47069 ACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATC 47128 ||| ||||||||| | || | || || ||||| | || ||| ||||| Sbjct 107717 ACTTGTTAATTTACCCATTGTGGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATC 107658 Query 47129 AATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188 ||| || || | | |||||| ||||| |||| || | ||||| | || ||||| || Sbjct 107657 AATGAACACAGCACGATCAGCAGCCATGTCTAGAACATGTCTTTGAGAAATTTCCCACAC 107598 Query 47189 TGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGATCCTCC 47245 || || || | | ||| || |||| ||| | ||| | | || ||||| || || Sbjct 107597 CGTCTTGTACAAATCTTTGATTTCTTGTGGAATATTTGGAATGTTCTGAATGGAACCA-- 107540 Query 47246 gttttctataat--tttgttttttaattcatttga--ccaaagttttcgttc-agttaat 47300 || || |||| |||||| ||| || | ||| | ||||| | || | ||| Sbjct 107539 -TTATCAGTAATGATTTGTTGTTTCATAC-TTTCATCCCAAATACCTAAATCTACCAAAT 107482 Query 47301 gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATAT 47360 ||| | ||| | |||||||||||||| ||||| ||||||| || | ||| || Sbjct 107481 CCTTTAACAAG-TATGGATTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTAC 107423 Query 47361 ATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCT 47420 || ||| ||| || ||||| | | |||| || | || || ||||| | ||||| || Sbjct 107422 ATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCA 107363 Query 47421 GTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNN 47480 || ||||| | || |||||||| |||||||| |||| || || || Sbjct 107362 GTGGGCATAGGGGCCACTAATAATGAGTTTCTTACACCATGTTCTTTAATGCCTTGTCTC 107303 Query 47481 NNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATT 47540 ||| ||||||||| | ||||| ||| | ||||| |||| |||| | || Sbjct 107302 AATGGTTCCCAATCCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAAATTGTAAAAGA 107243 Query 47541 CCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCA 47600 |||| || || ||||| | ||| || ||||| ||||| | || || | |||| Sbjct 107242 CCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCA 107183 Query 47601 CAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT 47660 ||| | |||||| |||| | || || |||||||| |||| | ||| | | || Sbjct 107182 CAAGATTGTTCCAAGGCACCGTGGTAAATAGTTTCAAAAATTTGTTGGTTCAATATTTTT 107123 Query 47661 GCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACA 47720 || || | |||||||| || || || ||||| || || | |||| Sbjct 107122 GCCTCAGGAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACA 107063 Query 47721 CCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTG 47780 |||| |||| |||||||| | |||| || || ||||| || | ||| || | | Sbjct 107062 CCAAGTGCAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAG 107003 Query 47781 TTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTA 47840 || ||| || | || || | | | | ||| |||||| Sbjct 107002 TTACGATCAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTG 106943 Query 47841 TTAAAATCAAAC--TTGTTATTTA-----------TA-----ACA-AACCTATTAAGTGC 47881 |||| || ||||| ||| || ||| || | ||| ||| Sbjct 106942 GCAAAACTGTACCATTGTTCCTTACCATCTGCCGATACTTCCACACAAGATGGTAA-TGC 106884 Query 47882 TATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCA 47939 ||||| |||| |||||| || || |||| ||| | || |||| | |||||| Sbjct 106883 GATAGAAGCTAAATTACAAACTGCAGTTTCATCCTTG--TCAGAGTATTCCACGATTTCA 106826 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999 ||||| ||| | |||| || ||| | || | || ||| | | |||||| Sbjct 106825 CAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACAT 106766 Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059 || ||||| || ||||| |||||||| |||||||| | || | ||| | || | | | Sbjct 106765 GCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATAC 106706 Query 48060 CA-AAC-----AGTCCTA---GCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT 48110 || ||| || ||| | |||| || || | ||| | || | ||||||| Sbjct 106705 CACAACTTTTGAGCTCTAATTGTCTTTCTACCACGGCCTTCTTGTTCATAACGTTCGTAC 106646 Query 48111 TTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170 || || |||||||| || ||||| |||| |||| |||||| |||| | Sbjct 106645 ---------AATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTT 106595 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 ||| | | | || ||| || |||| |||| || | |||| || | ||| || ||| Sbjct 106594 GGAGAGAAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATC 106535 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | ||| |||||||| || | | | |||||| || ||| ||| || | | Sbjct 106534 CATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATA 106475 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 |||| || || | ||||| | ||||||||||| ||||| | || | | | || ||| Sbjct 106474 TCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGT 106415 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 | ||||| || |||||||| | ||| | ||||| |||||| |||| | | ||||||| Sbjct 106414 CTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGG 106355 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 | | |||||| || ||||||| || || | ||| ||| || ||| | || ||| Sbjct 106354 ATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTA 106295 Query 48471 CTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529 ||| || || || |||||||| || | || || || | ||||| ||| | | Sbjct 106294 TGAATATGCAA-CCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGA 106236 Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTG 48589 ||||||||| ||||| || ||| ||| |||| | || |||||| | |||||| Sbjct 106235 ATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTG 106176 Query 48590 CGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGA 48649 ||||| ||| |||| ||| || | |||||||| ||||| || || | || ||| Sbjct 106175 TGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAATACCTCAATGA 106116 Query 48650 TAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATAC 48709 | ||| || || ||||| || |||| | ||||| ||| ||||| | | || Sbjct 106115 CATCAAATTGTAAGTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAAC 106056 Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769 | ||||| | || ||| ||||| ||| || | ||| || | || | || || Sbjct 106055 TCTCATTATTAGATGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGA 105996 Query 48770 TTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803 ||| || || || ||||| ||||| ||| || Sbjct 105995 ACGTTCTAAAGTCTTGAAACCGAAATAATTGAAT 105962 Score = 87.8 bits (96), Expect = 2e-12 Identities = 183/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 48933 GTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGA 48992 |||| || |||||||| || | || |||||||| |||| | |||| ||||| |||||| Sbjct 105805 GTTTGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGA 105746 Query 48993 ATTGTTGTACATGTACT-AGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTAC 49051 | || || |||||| | || |||| ||||| || |||||||||| ||||| || Sbjct 105745 ACAGTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAAC 105687 Query 49052 ACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCAT 49111 |||| || | || ||||| | | || || || | ||||||||| Sbjct 105686 ACCTTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGG 105627 Query 49112 ATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTC 49171 ||| | ||||| ||||| || ||| | | |||||| ||||| || | | ||| Sbjct 105626 ATCTAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGACGGGCTC 105567 Query 49172 TTTACGACCGTCACGTTTTATAACAAACAT 49201 ||||||||||| | || ||||||||| Sbjct 105566 CTTACGACCGTCTCTCTTGTAAACAAACAT 105537 >seq6 Length=912967 Score = 288 bits (318), Expect = 1e-72 Identities = 427/604 (71%), Gaps = 5/604 (1%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| |||||||| || | || |||||||||| |||||||||||||| || ||||| Sbjct 170957 ACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGTTAA 171016 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||| ||||| || || | || || ||||| || || | |||||||||||| || ||||| Sbjct 171017 ACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAAGAA 171076 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 | |||||| ||||| ||||| || |||| |||||| ||||| ||| || | || Sbjct 171077 AACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTCTTG 171136 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 |||||| | | |||||| || ||||| | || | ||| || | || || | ||| Sbjct 171137 AATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTGCATT 171196 Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 ||||| | | || || || |||||| || || | ||| ||||||| || | Sbjct 171197 AAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGAATAAGT 171256 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 ||| ||||| |||||||| || ||||| || ||||| || || | || || | ||| Sbjct 171257 TTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTCCGGTAT 171316 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 || || ||| | | || | || |||||||| |||||||| || ||||| ||||| Sbjct 171317 TTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGATGCTGC 171376 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGT----TAATGTATTCC 19435 ||| || |||| || | ||| |||| | ||||| || | | || |||||| Sbjct 171377 AAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT-TATTCC 171435 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 |||||| | ||| || |||||||| | ||||||| |||||||||| || || |||||| Sbjct 171436 AATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTC 171495 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTAT 19555 | || || | ||| || ||| |||||| || || || | |||||||||| ||||| Sbjct 171496 TCTTGTAAGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCTACGTTTAT 171555 Query 19556 TTTC 19559 |||| Sbjct 171556 TTTC 171559 >seq8 Length=833532 Score = 212 bits (234), Expect = 7e-50 Identities = 550/822 (67%), Gaps = 26/822 (3%) Strand=Plus/Minus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTA 47934 ||||| | || || ||||| || || ||| ||||| ||||| | |||| | || | Sbjct 434688 AGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGA--ACTATACTCTACAA 434631 Query 47935 TTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTT 47992 | ||| |||| |||| | |||| || ||||||||||||| ||||| ||| Sbjct 434630 TCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTTTGATTTGATTTAAA-- 434573 Query 47993 GTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGAT 48052 |||||||| ||||||||||||||||| || || ||||||| || | || | || Sbjct 434572 GTTACATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACTTGGGCTTGTA-GA- 434515 Query 48053 AGATTTCCAA--ACAG-TCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATG--TTCG 48107 ||||| | |||| | || |||| || || | ||| | || ||| Sbjct 434514 --ATTTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTAATTC-CGTGGATTCA 434458 Query 48108 TATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCA 48167 |||| ||||| || ||| || || | || || |||| | || || || |||| Sbjct 434457 TATTGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACTTAGGCCCGGTGCTTCA 434398 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 | |||| | | |||||||| | | | | ||| | |||| || | ||||||| Sbjct 434397 TCTGGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTTCATGAACAAATCTGGT 434338 Query 48228 ATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTT-TT 48286 ||||| || || || |||||||| || | ||| | ||| || || ||| || || || Sbjct 434337 ATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTTACCATGGTTTTTTCTT 434278 Query 48287 AAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA--CA 48344 || | ||| ||| || | | ||| | |||||| ||||| | |||||| || || || Sbjct 434277 AATTGCAA-AAAATCAAAAACATCTGAATGCCAGGGTTCCAGATATAT--ACAGTATGCA 434221 Query 48345 CCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAAC 48404 ||||| || || || ||||| || |||| |||||| || ||||| || |||| | | | Sbjct 434220 CCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTATTGAAAACACGAAGC 434161 Query 48405 ATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTT 48464 || |||| | ||| | || |||||||| | |||||| | |||| ||| | || ||| Sbjct 434160 ATGGGGATTAGTCCACTAGAAATACCATTAGATCCCGATACATAAGCCCCATTCGCCCTT 434101 Query 48465 ATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC-ACACCGTTT 48523 || ||| | ||||||| || ||||||| || || || ||||| | | | Sbjct 434100 ATGTTAGAAGCATAAATACCAATTCCACCTGAAGCCTTGGAGATAAGAGCTGTATCATGC 434041 Query 48524 AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGA 48583 || | | | | ||||| || ||| ||| ||| ||||| | ||||||||| ||| Sbjct 434040 AATGTTCGGA-AGATTCCATCAATAGAATCCTCTTTCATACCAACTAGAAAACAGGAAGA 433982 Query 48584 CATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTT 48643 | | ||| | ||||||| ||||| ||||| || |||||||||||||| |||| Sbjct 433981 AAGATATTGATTAACTGTTCCTGCGTTAAACAATGTGGGCGATGCATGAATAAAGTATTT 433922 Query 48644 CTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC 48685 ||| | || || ||| |||||||| |||| ||| ||||| Sbjct 433921 TCGTGACATCAGTTCATAGGTTTCAATCACAGCATCAATATC 433880 >seq15 Length=608780 Score = 208 bits (230), Expect = 9e-49 Identities = 599/911 (66%), Gaps = 9/911 (1%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || |||| ||||| || ||||||||||| || || ||| ||| || || | Sbjct 278697 TTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTT 278756 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| || ||||||||| | ||||| || |||| | || | | | ||| Sbjct 278757 TCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTTTCGTTACCAAGAGCCACTAGA 278816 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || || || |||| | ||| |||||| | | ||||| || | | Sbjct 278817 AGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGA 278876 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 || || || |||||| || || |||| ||| || || || || | ||||| Sbjct 278877 GCCACGGGGAGAGCATCTTCAAAGTATCTCTT-TTCAATTGAAACAGCTTCAGTAATAAT 278935 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGT-ATAGAAGATGTTTAAACATCAAACATGCAA 18967 | | || ||||| | | || || || ||| || || | | ||| |||| Sbjct 278936 CTTTTCCACAATATCTGGACTTGGTCTGTGATTCAAG-TGAGCGAATAATAGACAGGCAA 278994 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 | || ||| | || |||||||| | |||||||| ||||| || |||| ||| |||| Sbjct 278995 AGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCA 279054 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 |||| || | || || ||||| || || | ||| || || || || ||||| ||||||| Sbjct 279055 TCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTT 279114 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 | ||||| ||||| || |||| |||||| ||||| || || | || |||||||| Sbjct 279115 CAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTGAATCCACC 279174 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 | | ||||| || ||||| | | | | ||| || | || || | |||||||| | Sbjct 279175 TAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATA-AG 279233 Query 19208 ACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | || || || | | || || || | ||| ||||| ||| |||| |||| || Sbjct 279234 AAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAG 279293 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || || ||||| || || || || ||||| || || | ||||| | || || ||| Sbjct 279294 TGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACT 279353 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 || | | || | ||||||||||| ||||| || || || || || || || || Sbjct 279354 TCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAGCGAAGAAC 279413 Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGT--TAATG-TATTCCAATCATTA 19443 |||| || | ||| ||| | ||||| | | | | || | ||||| |||| Sbjct 279414 GCTAGAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTGTTGTTCCAGTCATCC 279473 Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503 | ||| | ||||| | |||||| ||||||| || || || |||||| | || || Sbjct 279474 AAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTCTCTTGTAG 279533 Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTA 19563 | ||| || || | ||||| ||||| || | |||||||||| || || || || Sbjct 279534 GCTTGCCAGATTTCGTGGTATTGAATAGGGAAAAGAACAAATCTACGCTTGTTCTCGATA 279593 Query 19564 AGAATAGGTTC 19574 || | ||||| Sbjct 279594 AGCAATGGTTC 279604 >seq3 Length=965618 Score = 203 bits (224), Expect = 4e-47 Identities = 1103/1764 (63%), Gaps = 41/1764 (2%) Strand=Plus/Plus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| || ||||| || || |||||||| ||||| | ||| |||| |||||||| Sbjct 324370 GCTGCTTGTGTTCTCAAGTAGTACATACCCGTCTTGAGACCCTTCTTCCAACCATAGAAG 324429 Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123 |||||||| || |||||| |||| | || || || || | || || Sbjct 324430 TGCATACTTGTCAATTTACCCATTGTAGGAGCGCGCATGTGGATGTTCAAGGAATGCGAT 324489 Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183 ||||| || || | |||||| |||||||| | || | ||||| | || ||| Sbjct 324490 TGATCGATGAACAAGGAACGATCAGCGGCCATATCAATAACATGTCTTTGAGAAATTTCC 324549 Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGAT 47240 || || || || || | | |||||| || | ||||| ||| | | |||||||| || Sbjct 324550 CACACCGTCTTGTACAAGTTTTTAATCTCCTGTGGGATATTTGGAATGTTTTGAATGGAA 324609 Query 47241 CCTCCgttttctataat--tttgttttttaattcatttgaccaaagtt--ttcgttcagt 47296 || || || |||| |||| | ||| || | || || || | | || || Sbjct 324610 CCA---TTGTCAGTAATGATTTGCTGTTTCATACTTTCATCCCAAATACCTAAGTCCACC 324666 Query 47297 taatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCT 47356 ||| || | ||| | ||||| ||||| || ||||| ||||| || || | ||| Sbjct 324667 AAATCCTTCAACAAG-TATGGATTGACAATCTGGAATTCACCAGACAGAACACGACGAGA 324725 Query 47357 ATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGA 47416 || || ||| ||| || ||||| | | |||| || | || |||||||| | || || Sbjct 324726 GTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAAATTTGTGATGTCGA 324785 Query 47417 TGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATT-TTTG-TATCTNN 47474 ||| || ||||| | || || | || ||||| || |||| || |||| || || Sbjct 324786 TGCGGTTGGCATAGGAGCCACCAGCAATGAGTTTCTCACACCATGTTCTTTGATACCTTG 324845 Query 47475 NNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGA 47534 ||| ||| ||||| ||||| || || || ||||| ||| |||| Sbjct 324846 TCTCAATG--GTTCCCAGTCCCATAGATCAGAAGGTTTCTTATCCCAAAGATCGAATTGC 324903 Query 47535 AGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCG 47594 |||| |||| || ||||| || | || || ||||| ||| | | || || Sbjct 324904 AGAAGACCTTGGGAGATAGGAGAGCCTTCGTAGGTGGAATAAGCACCATGAATCTTGGCC 324963 Query 47595 AGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGA 47654 | |||| || | ||| | |||| || || || |||||||| |||| | || | Sbjct 324964 AATTCATAAGATTGTTCTAGAGCACCATGGTAAATAGTTTCAAAAATTTGTTGATTCAAT 325023 Query 47655 TTCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCT 47714 || ||||| || | ||||||||||| | || || |||||||| || Sbjct 325024 TTTCTTGCCTCAGCAGATTCAAAAGGCAAACGCAATAACATAAAAGTGTCTGCCAACCCG 325083 Query 47715 TGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGA 47774 | ||||||| |||| ||||| || | |||| || || || || || | ||| Sbjct 325084 TTCACACCAAGTGCAATAGGTCTGTGTCTCATATTGGATCTCTTGGCCTCAGGAACTGGG 325143 Query 47775 TATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTT 47834 || | ||| ||| || | || || | ||| ||| | Sbjct 325144 TAGTAGTTACGATCAATCACCTTGTTCAAGTTACGCGTAATAGCCTTGGCAACTTCATGT 325203 Query 47835 AATTTATTAAAATCAAAC--TTGTTATTT-----------ATA-----ACA-AACCTATT 47875 | || |||| || ||||| || ||| ||| || | | Sbjct 325204 AGCTTGGCAAAACTGTACCATTGTTCCTTACCATCTTCAGATACTTGCACACAAGATGGT 325263 Query 47876 AAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTAT 47935 || ||| ||||| || | |||||| || || ||||| | || || |||| | || Sbjct 325264 AA-TGCGATAGAAGCCAAATTACAAACTGCAGTCTCATCTTTATCAGAGTATTCCACAAT 325322 Query 47936 TTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTT 47995 |||| ||||| ||| | | || || ||| | || | |||||| | |||| Sbjct 325323 TTCACAACATAAATTGGAAGACTTAATCACACCGAGGTTCTTTTGATTACTCTTGCTGTT 325382 Query 47996 ACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGA 48055 ||| || |||||||| | ||| |||||||| |||||||| | || | || | |||| Sbjct 325383 ACAGGCATCCTTGTATATCATGAAAGGTGTACCAGTTTCGGTTTGTGCCTCCAAAATAGC 325442 Query 48056 TTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTA--TTTA 48113 | ||| | | ||| | || |||| | | || ||||| || || Sbjct 325443 GTACCACAATTTTTGAGCTCTAATCGTCTTTCTACCACGACCTTCTTGTTCATAACGTTC 325502 Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173 | |||||| |||||||||| || ||||| || | |||| ||||| |||| | || Sbjct 325503 G--TATAACCTCTCAAATTCTTCACCATAAACGTCTGCTAAACCAGGTGCTTCACTTGGG 325560 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 | | | || ||| || || | |||| || | ||||||| | || || ||||| Sbjct 325561 GAGAAAAGTGTCCATTCTTCGTTCTTTTCAACACGTTTCATAAACAAGTCAGGAATCCAT 325620 Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCA 48293 || ||| || ||||| || | | | ||| || || ||| || | ||| ||| Sbjct 325621 AGTGCTGGGAACAAATCTCTTGCACGAACTTCGTCCTTACCATGGTTTTTCCTAATATCA 325680 Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353 | || || | ||||||| |||||||| || ||||| | || | |||| |||| Sbjct 325681 ATGAAATCAAAGATATCAGAGTGCCATGGCTCCAAATAAAGGGCAAACGCACCAGGTCTC 325740 Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413 || ||||| || || || | || | ||||| |||||| | || | | ||| |||| Sbjct 325741 TTGTTACCACCCTGGTCCACGTAACGTGCAGTGTTGTTAAACACACGAACCATAGGGATT 325800 Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473 | |||||| || |||||||||| || | ||| ||| ||| ||| | || ||| | Sbjct 325801 AAACCATTGGAAGTACCATTGGTACCTGCAATGTAAGATCCGGTAGAACGAATGTTATGA 325860 Query 48474 AT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATC 48532 || || || || |||||||| || | || || || | ||||| ||| || ||||| Sbjct 325861 ATGTGCAA-CCCAATACCACCAGCAGTCTTGGAGATCATGGCACATTCTTTTAGTGTATC 325919 Query 48533 ATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGG 48592 ||| || ||||| || ||| ||| |||| | || |||||| | |||||| || Sbjct 325920 ATAGATACCTTCAATGGAATCTTCTTTCATCGCAACAAGGAAACAAGATGCCATTTGTGG 325979 Query 48593 ATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAA 48652 ||| || |||| ||| || | ||||| || ||||| ||||| | | ||| | Sbjct 325980 ATGTGGGGTACCTGCATTGAAAAGAGTTGGCGAAGCATGGATAAAATACCTTAATGACAT 326039 Query 48653 CAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACG 48712 ||| || || ||||| || |||| | ||||| ||| ||||| | | || | Sbjct 326040 CAAATTGTAGGTTTCGATCGCAGACTTAATATCGTCACCATGAATACCCAAACTAACTCT 326099 Query 48713 CATTAACATATATTGAGGTCTTTC 48736 ||||| | || || |||||||| Sbjct 326100 CATTATTAGATGCTGTGGTCTTTC 326123 >seq2 Length=1098330 Score = 194 bits (214), Expect = 2e-44 Identities = 337/481 (70%), Gaps = 12/481 (2%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || | |||||| ||||| || || | ||||||||| |||| ||||| ||| || | Sbjct 210948 TCATGAACAAATCTGGAATCCATAGTGCAAAAAATAAATCTCTAGCTCTTAATTCATCCT 210889 Query 48271 TGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 | ||| ||| || |||| | || |||| || | | ||| | |||||| ||||| ||| Sbjct 210888 TACCATGGTTCTTTCTTAACTGCAGGAAA-TCAAAAACATCTGAATGCCAGGGTTCCAAA 210830 Query 48330 TATATTGCCATTAC--ACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTAT 48387 ||||| || ||| ||| || || || || ||||| || || | |||||||||||||| Sbjct 210829 TATATA--CAGTACGCACCCGGACGCTTGTTTCCTCCCTGGTCCACATATCTGGCAGTAT 210772 Query 48388 TGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATAT 48447 | ||| |||| | || ||| || || |||||||| || ||||||| | ||| || | || Sbjct 210771 TATTAAAAACACGTAGCATGGGAACTATACCATTAGAGGTACCATTAGATCCAGACACAT 210712 Query 48448 AACTTCCACTAGCTCTTATATT--ACTAATTGAAATACCTATACCACCTGCCATTTTAGA 48505 ||||| || ||||| || || || |||||| || || || | || || Sbjct 210711 GGGCCCCACTTGCCCTTATGTTGGACACAT--GAATACCAATTCCGCCCGAAGCCTTGGA 210654 Query 48506 TATTAGAGC-ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATAT 48564 |||||||| | | | ||||| | | | | ||||| || ||| ||| ||| ||||| Sbjct 210653 GATTAGAGCTGTATCCTCTAAGGTTTTGA-ATATTCCCTCAATAGAATCCTCTTTCATAC 210595 Query 48565 TTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAG 48624 | ||||| || ||| | | ||| || |||| || || ||||| || | Sbjct 210594 CAACAAGAAAGCAGGAAGAAAGATATTGATTCACTGTGCCTGCGTTGAACAATGTGGGGG 210535 Query 48625 ATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATAT 48684 ||||||||||||| ||||| ||| | || || ||| ||| |||| |||||||| |||| Sbjct 210534 ATGCATGAATAAAATATTTCCGTGACATCAGTTCATAGGTTACAATCACAGAATCAATAT 210475 Query 48685 C 48685 | Sbjct 210474 C 210474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107254200800