Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq6 170 3e-37 seq12 154 2e-32 seq15 152 8e-32 seq25 136 6e-27 seq3 105 1e-17 seq17 96.9 5e-15 >seq6 Length=912967 Score = 170 bits (188), Expect = 3e-37 Identities = 363/544 (67%), Gaps = 3/544 (1%) Strand=Plus/Plus Query 18150 ATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAA 18209 |||||| ||| |||||||| ||||| |||||||| ||||| | || ||||| ||| | Sbjct 170950 ATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGA 171009 Query 18210 ACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAG 18269 | ||||| || ||||||| ||| | || || | |||||| || | || || | | Sbjct 171010 AAGTTAAACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCG 171069 Query 18270 AAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTAT 18329 | ||||| | ||| || || || || || | ||||||||||||| || | ||| Sbjct 171070 AGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTAT 171129 Query 18330 TGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTA 18389 | | ||||| | |||||||||| | | || || || | || | Sbjct 171130 CGTCTTGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAA 171189 Query 18390 TAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449 | |||||||| ||| || |||| | || |||| | | || || || || || | | Sbjct 171190 TTGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCG 171249 Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509 |||| |||||||||| || ||||||| ||||| || | || || | |||||| Sbjct 171250 AATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCT 171309 Query 18510 CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569 | || ||| | ||| | | || | || ||||||||||||||||| ||||| || | Sbjct 171310 CCGGTATTTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGG 171369 Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCA---TTATCCTTGAGAT 18626 | ||| || || || | || | |||||||| | ||||| | | | | || Sbjct 171370 ATGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTAT 171429 Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 | ||||| ||||| | ||| || |||| ||| | |||||| | ||||||||| |||| || Sbjct 171430 TATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTT 171489 Query 18687 CGGC 18690 | || Sbjct 171490 CTGC 171493 >seq12 Length=625618 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || | ||||| || |||||||| || || || ||| ||| Sbjct 615979 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 615920 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| || || || || ||||||||||| || |||||||| ||| Sbjct 615919 GATACCATTGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAA 615860 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| || | |||||||||||| || ||||| || |||||||| |||||||| Sbjct 615859 CAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAAC 615800 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| ||| | || || ||||| || |||||| ||||||| ||| Sbjct 615799 AT-TCAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGAGGTGGT 615752 Score = 113 bits (124), Expect = 7e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || ||||| || || | ||||| ||| ||| Sbjct 615086 ATGCAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCC 615027 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || || ||||||||||| || || || || || Sbjct 615026 GATACCATCGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACCAG 614967 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | ||| ||||| || || || ||| || |||||||| ||||||| Sbjct 614966 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATA-- 614909 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| ||| | || || ||||| || |||||| ||||||| ||| Sbjct 614908 ACATCCAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGAGGTGGT 614859 Score = 100 bits (110), Expect = 4e-16 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || |||| |||||| ||||| | ||| Sbjct 512403 TTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATT 512462 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 ||||| || || || || || || ||||| || || || || |||||||||||| Sbjct 512463 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 512522 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | ||| |||||||| | |||||| ||||| || || ||||| | | ||||||| Sbjct 512523 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACA--ACATCCAAA 512580 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || || || ||||||| ||||| ||| Sbjct 512581 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 512621 >seq15 Length=608780 Score = 152 bits (168), Expect = 8e-32 Identities = 361/545 (66%), Gaps = 5/545 (1%) Strand=Plus/Plus Query 18150 ATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAA 18209 |||||| ||| ||||| || || || |||||||| |||||| | || ||||||||| | Sbjct 278980 ATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGA 279039 Query 18210 ACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAG 18269 | |||| || ||||| | ||| | || || | |||||| || | |||||| | | Sbjct 279040 AGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTG 279099 Query 18270 AAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTAT 18329 | ||||| ||||| ||||| || || || | ||||||||||||| || | || | Sbjct 279100 AGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAA-AGGGCTTCT 279158 Query 18330 TGCTC-AGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388 | || | ||||| | ||||||||| | | || || || | || Sbjct 279159 TCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCA 279218 Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448 || |||||||| || ||| || ||||| || | | || || || || |||||| Sbjct 279219 ATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAA 279278 Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508 || ||| ||||||| || ||| ||||||| || || || | || || | | || Sbjct 279279 GAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCT 279338 Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568 || ||| ||| | ||| | | || | || |||||||||||||| || |||||||| Sbjct 279339 TCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCG 279398 Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GA 18625 | | ||||| || || | ||| | ||||||| | ||||| || || | Sbjct 279399 GATGCAGCGAAGAACGCTAGAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTG 279458 Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685 |||||||| ||||| | ||| | | ||| | |||||| | |||||| || |||| | Sbjct 279459 TTGTTCCAGTCATCCAAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCT 279518 Query 18686 TCGGC 18690 || || Sbjct 279519 TCTGC 279523 >seq25 Length=339617 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || |||||||| || |||||||| || || || ||| |||| Sbjct 150536 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 150477 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || ||||| || ||||| || ||||| || ||| Sbjct 150476 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGACCAA 150417 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| || ||||| || ||||| |||||||| || ||||| || Sbjct 150416 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 150357 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || ||||| || || || ||||||||||| ||| Sbjct 150356 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGT 150309 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 150308 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 150249 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || ||||| || || || |||||||| ||| Sbjct 150248 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 150189 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | ||| |||||||| || || ||| |||||| | || ||||| || Sbjct 150188 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 150129 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || | || ||||||||||||| ||| Sbjct 150128 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGGT 150081 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || || || |||||| ||||| | ||| Sbjct 40984 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 41043 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 ||||| || || || || || || ||||| || || || || ||||||||||| Sbjct 41044 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTA 41103 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | || |||||||| | |||||| ||||| || || || || | | ||||||| Sbjct 41104 ATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACA--ACATCCAAA 41161 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || || || ||||||| ||||| ||| Sbjct 41162 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 41202 >seq3 Length=965618 Score = 105 bits (116), Expect = 1e-17 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| | || || ||||| || || || ||||| ||||||| ||| | Sbjct 656807 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 656748 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || || || || || || || || || || || || Sbjct 656747 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 656688 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| ||||| || || || || Sbjct 656687 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 656628 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || || ||||||| ||||| |||| Sbjct 656627 A--ACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 656576 >seq17 Length=530849 Score = 96.9 bits (106), Expect = 5e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || ||||| |||| || ||| |||| Sbjct 311310 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 311369 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || || || || ||||| || || || || ||| Sbjct 311370 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 311429 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| |||||||| | |||||| ||||| || || || || | Sbjct 311430 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACA-- 311487 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | ||||||| || | || | || || || | ||||| ||||| |||| Sbjct 311488 ACATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGGTG 311538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731869987352000