Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq25 170 4e-37 seq12 149 1e-30 seq6 145 2e-29 seq3 132 9e-26 seq17 127 4e-24 >seq25 Length=339617 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| || | ||| || || || | ||||| |||||| ||| || |||||||| Sbjct 149854 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 149913 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | |||| | || |||||||| ||||| ||||| || ||||||||||| ||||| || Sbjct 149914 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 149973 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| || || || |||||| ||| |||||| |||| ||| || ||||| ||| Sbjct 149974 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 150033 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||| |||||||||||||| || ||||| | ||| || ||||| Sbjct 150034 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 Score = 125 bits (138), Expect = 1e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 || ||||||||||| | | || || || || ||||||| || || ||| || || Sbjct 41207 ATGATACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAG 41148 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||||| || |||| |||| |||||||| |||||||| ||||||||||| ||||| ||| Sbjct 41147 TCAGACAACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCA 41088 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 ||||| || ||||| || || || || || || || || || | || || ||| Sbjct 41087 GGTGGGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGAT 41028 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 || || || | ||| ||||| |||||||| || || || | ||| Sbjct 41027 TCGACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 40984 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | ||| | || || ||| || |||||| Sbjct 150307 ATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCA 150366 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || |||| ||| || |||||||| || ||||||||||| || || Sbjct 150367 GACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGA 150426 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || || || || | ||| || ||||| Sbjct 150427 GGAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCA 150486 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||| || |||||||| || || |||| || |||||||| Sbjct 150487 ACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || | || | ||||| || || ||| || |||||| Sbjct 150079 ATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCA 150138 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | ||| |||||||||||||||| ||| ||||| || || Sbjct 150139 GACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGA 150198 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || || || || || || | || || || || Sbjct 150199 GGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 150258 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||| || ||||||||||||| || || | || || ||||| Sbjct 150259 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 >seq12 Length=625618 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | ||| || ||||| | ||||| ||| || ||| |||||||| Sbjct 614857 ATACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCG 614916 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || | |||| || | ||||||||| |||||||||| ||| || || |||||| Sbjct 614917 GATAAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGT 614976 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || || || || || || || | ||| || ||||| Sbjct 614977 GGAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCC 615036 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| || |||||||| || | || || | || |||||||| Sbjct 615037 ACTTCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 143 bits (158), Expect = 5e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||||||||| || | ||| || ||||| | ||||| || |||| || || |||||||| Sbjct 615750 ATACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGA-ATGTTATAATC 615808 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||| || | | || |||| ||| ||||| |||||||||||||| ||||| || || Sbjct 615809 GGATAAAGTCCTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGG 615868 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||||||||| || || || || || || || | ||| || ||||| Sbjct 615869 AGGAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTC 615928 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||| || |||||||||| || |||| || |||||||| Sbjct 615929 AACCTCCAAGGTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 615979 Score = 140 bits (154), Expect = 6e-28 Identities = 175/239 (73%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || || || ||||||| || || ||| | Sbjct 512631 GTTCAATGATACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGT 512572 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | ||||| || || |||| |||| |||||||| |||||||||||||| ||||| |||| Sbjct 512571 TGTAATCGGACAACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 512512 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| || || || || || || || || || | || | Sbjct 512511 GGTCAGGTGGGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAG 512452 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 | ||||| || |||||||| ||||| |||||||| || || || | || | ||||||| Sbjct 512451 AGGATTCGACCTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATT 512395 Score = 140 bits (154), Expect = 6e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| || | ||| || || ||||| |||| || ||| || || ||||| |||| Sbjct 614631 ACCACCTCTTAGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGA-ATGTTATAGTCAG 614689 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 |||| |||| |||| || | ||| ||||| |||||||||| ||| || || ||||||| Sbjct 614690 ATAAGGTTCTACCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTG 614749 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| || || || || || || | || || ||||| | Sbjct 614750 GAATACCTTCCTTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCA 614809 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | |||| ||| || ||||||||||||| ||||| | ||| || ||||| Sbjct 614810 CCTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||| |||||||| |||| |||| || | ||| ||||| |||||||||| ||| Sbjct 615569 GATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCT 615628 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || || |||||||| || ||||| || ||||| || || || || || || | Sbjct 615629 TTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTAACGTTGTCGATGGT 615688 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||||| || |||| ||| || ||||||||||||| ||||| | ||| || || Sbjct 615689 GTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTG 615748 Query 192534 CAT 192536 ||| Sbjct 615749 CAT 615751 >seq6 Length=912967 Score = 145 bits (160), Expect = 2e-29 Identities = 391/601 (65%), Gaps = 11/601 (2%) Strand=Plus/Plus Query 49816 ATATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAA 49875 ||| || ||| |||||||| || || ||||| ||||| ||| | || ||||||||| | Sbjct 170950 ATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGA 171009 Query 49876 AAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAG 49935 ||||||| |||||||||| || |||| || | |||||| || | ||||| | | Sbjct 171010 AAGTTAAACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCG 171069 Query 49936 AAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTAT 49995 | ||||| | ||| || || ||||| || | || |||| | || | | ||| Sbjct 171070 AGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTAT 171129 Query 49996 CATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTA 50055 | ||| ||||| | || ||||| ||||| |||| ||||| | || || ||||| | Sbjct 171130 CGTCTTGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAA 171189 Query 50056 TAGCTTTAAATAA---TTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATA 50112 | || |||||||| |||| ||| | | || |||| Sbjct 171190 TTGCATTAAATAAAAATTCACTTT---CCTCGGTATCTCTACTGTAGGTATCAATCAATA 171246 Query 50113 AAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTG 50172 ||||| |||||||||| | | |||||| || || || || || | | Sbjct 171247 GCGAATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAG 171306 Query 50173 CTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCAT 50232 | || | || || || | | |||| || || ||||||||| |||||||||| Sbjct 171307 CCTCCGGTATTTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCAT 171366 Query 50233 CAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCA---TTA-TCTTTT 50288 | |||||||| ||||| |||| || | ||| |||| | ||||| | | || | | Sbjct 171367 CGGATGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCT 171426 Query 50289 AAATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGAT 50348 | | |||| | || ||| ||| || |||||||| | |||||| ||||||||||||| Sbjct 171427 TATTATTCCAATCATCCAA-ATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGAT 171485 Query 50349 GCTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATAT 50408 ||| | | | | || || ||| | || ||| || || |||||| || || ||| || Sbjct 171486 GCTTCTGCTCTCTTGTAAGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAAT 171545 Query 50409 C 50409 | Sbjct 171546 C 171546 >seq3 Length=965618 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || || || Sbjct 656577 ACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 656636 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 656637 CAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 656696 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || || || || || || ||||| |||| || || ||||| || Sbjct 656697 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 656756 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||||| |||||||| ||||| || || || || | ||| |||||||| || Sbjct 656757 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 >seq17 Length=530849 Score = 127 bits (140), Expect = 4e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || || || || |||| |||| |||||||| |||||||||||||| ||||| Sbjct 311492 GATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCT 311433 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||| |||||||| || ||||| || || || || || || ||||| |||| Sbjct 311432 TTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGT 311373 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||||| || ||||| |||||||| ||||| || || || || | ||| ||||| Sbjct 311372 GTCAGAAGATTCAACCTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTG 311313 Query 192534 CAT 192536 ||| Sbjct 311312 CAT 311310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984477224997000