Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq12 129 5e-25 seq17 125 6e-24 seq25 107 1e-18 >seq3 Length=965618 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 656578 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 656637 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 656638 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 656697 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| ||||| || ||| || | |||||| | || | |||||||||| ||| || Sbjct 656698 ATACCCTCCTTGTCCTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 656756 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| || || || || || || || || || || ||||| |||||||| || Sbjct 656757 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 >seq12 Length=625618 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || | || ||||| |||||||||||||| || | | ||| | | ||| || Sbjct 614650 ACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTACCATCCTCT 614709 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || || ||| | || | ||||||||| || || |||||||| || |||||||| Sbjct 614710 AGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTG- 614768 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| |||| || || | || | |||||||| ||| || || | ||| |||||||| Sbjct 614769 AATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTT 614828 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| ||||| || ||||| Sbjct 614829 ACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || || || ||||| ||||||||||| | | || | | ||| || Sbjct 614878 ACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTCCTACCATCCTCT 614937 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || ||| | || | ||||||||| || || |||||||| ||||| || || Sbjct 614938 AGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCTTTATCCTG- 614996 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| |||| ||||| | || | || || ||| ||| ||||| ||||| || ||||| Sbjct 614997 AATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCACTTCCAGAGTGATCGTTTT 615056 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | || || || || |||||||| Sbjct 615057 ACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || || || ||||||||||||||||| | | || | | || || Sbjct 615771 ACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCTTCC 615830 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || || ||| | || |||||||| || || || |||||||| ||||| || || Sbjct 615831 AGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCCTG- 615889 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| |||| ||||| | || | || || ||| ||| || || | || ||||| || Sbjct 615890 AATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGTCTT 615949 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| || ||||| || |||||||| Sbjct 615950 ACCAGTTAGAGTCTTAACGAAAATCTGCAT 615979 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | || ||||| ||||| ||||| ||||| | Sbjct 512620 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGAC 512561 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 512560 AACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 512501 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| |||| ||||| | || | |||||||| ||| || Sbjct 512500 ATACCTTCCTTGTCCTG-AATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGAC 512442 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || || || ||||| || || || |||| | ||||||| Sbjct 512441 CTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATT 512395 >seq17 Length=530849 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 311536 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 311477 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 311476 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 311417 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | |||||| | || | |||||||||| ||| || Sbjct 311416 ATACCTTCCTTGTCCTG-AATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAAC 311358 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || || || ||||| |||||||| Sbjct 311357 CTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 >seq25 Length=339617 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||| || || || ||||| || || ||||| ||||| | | ||| | ||| Sbjct 150097 AGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCC 150156 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || |||||| | || | |||||| || || || ||||||||||| || || Sbjct 150157 TCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC 150216 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| |||| ||||| | || | ||||| ||| || ||||| | ||| ||||| Sbjct 150217 TG-AATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGT 150275 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||||| || || || || || ||||| Sbjct 150276 TTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218167131020