Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq25 188 1e-42 seq12 185 2e-41 seq3 159 7e-34 seq17 154 3e-32 >seq25 Length=339617 Score = 188 bits (208), Expect = 1e-42 Identities = 181/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || || ||||| ||||| ||||| ||||| || || ||||||| Sbjct 150308 TACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAG 150367 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | ||||||||||||| ||||| ||||||||||| || | ||| ||||| || |||| Sbjct 150368 ACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAG 150427 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| ||||||| || || || || || |||||| || ||| | Sbjct 150428 GAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAA 150487 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 | ||||| || || ||||| || ||||| ||||| || || |||||||| || Sbjct 150488 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCATAAT 150539 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 82601 AACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTC 82660 ||| |||||||||||||| |||||||| || || |||||||| ||| ||||||||||||| Sbjct 149871 AACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTC 149930 Query 82661 TAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720 | ||| || || ||||| || | ||| ||||| || ||||| || |||||||| || || Sbjct 149931 CAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTG 149990 Query 82721 AATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTT 82780 ||| || | ||| ||||| || || |||||| || ||| ||||||||||| || || || Sbjct 149991 AATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTT 150050 Query 82781 GCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || ||||| || ||||| Sbjct 150051 ACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | ||||| | ||||||||||||||| ||||| || || ||||||| Sbjct 150080 TACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAG 150139 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || || || ||||| || ||||||||||||||||||||||| ||||||| Sbjct 150140 ACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAG 150199 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||||| || || || || || || || || || | Sbjct 150200 GAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 150259 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| || || || || || | ||||| || || || ||||| Sbjct 150260 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 >seq12 Length=625618 Score = 185 bits (204), Expect = 2e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | | ||| || ||||||||||| || || || || |||||||| | Sbjct 615751 TACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGG 615810 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||||||||||| ||||| || || |||||||||| ||||||||| ||||||| Sbjct 615811 ATAAAGTCCTACCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAG 615870 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| |||||||||| || || || ||||| ||||| || ||| | Sbjct 615871 GAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAA 615930 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 | ||||| || || ||||| || || | ||||| || || |||||||| || Sbjct 615931 CCTCCAAGGTAATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCATAAT 615982 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | | ||| || ||||||||||| || || || || |||||||| | Sbjct 614858 TACCACCTCTTAGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGG 614917 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||||| || ||||||||||| || ||||||||||||||||| || || || | Sbjct 614918 ATAAAGTCCTACCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTG 614977 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| |||||||||| || || || || || ||||| || ||| | Sbjct 614978 GAATACCTTCTTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCA 615037 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| ||| ||||| || || |||| ||||| || || |||||||| Sbjct 615038 CTTCCAGAGTGATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 172 bits (190), Expect = 1e-37 Identities = 182/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | ||||| ||||||| ||||||||| || || || || ||||| | Sbjct 512622 TACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGG 512563 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || | Sbjct 512562 ACAACGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 512503 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || |||||||||| || || || ||||| || ||| | ||| | Sbjct 512502 GGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGA 512443 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTT 82820 | || | ||| || ||||| || ||||| ||||| |||| | ||||||| |||| || Sbjct 512442 CCTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATTCCTATAGTT 512386 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | | ||| ||||| | |||||||| || || || ||||| ||||| Sbjct 614631 ACCACCTCTTAGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGA 614690 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||||||| || |||||||| || || ||||||||||||||||| || || || || Sbjct 614691 TAAGGTTCTACCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGG 614750 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||||||||||| || || || || || || ||| | ||| || Sbjct 614751 AATACCTTCCTTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCAC 614810 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || || || || | || || ||||| || ||||| Sbjct 614811 CTCTAAAGTGATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673 |||||||| ||||| || ||||| ||||||| ||||||| || |||||||| || || Sbjct 615555 GTAGATTCCTTCTGGATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCC 615614 Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 ||||||||||||||||| || || || || || |||||||| ||||||||||||| || Sbjct 615615 GCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTA 615674 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || || || || || ||| | ||| || || ||||| || || || || || | || Sbjct 615675 ACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTT 615734 Query 82794 TTTACAAATATCTGCAT 82810 || ||||| || ||||| Sbjct 615735 TTCACAAAGATTTGCAT 615751 >seq3 Length=965618 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| || ||||| || || || || || || || Sbjct 656577 ACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 656636 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || || Sbjct 656637 CAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 656696 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || |||||||| | || ||||| ||||| || ||| || ||| || Sbjct 656697 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 656756 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 656757 TTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 656804 >seq17 Length=530849 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| || ||||| || || || || || || || Sbjct 311537 ACCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 311478 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || || Sbjct 311477 CAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 311418 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || |||||||| | || ||||| || || || ||| || ||| || Sbjct 311417 GATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAAC 311358 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 311357 CTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824432474580