Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 145 2e-29 seq25 140 8e-28 seq17 93.3 1e-13 seq3 89.7 1e-12 >seq12 Length=625618 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || |||||||||||| ||||||||||| ||| || Sbjct 615083 CAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCCGAT 615024 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || |||||||| ||| || ||| ||| Sbjct 615023 ACCATCGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACCAGCAA 614964 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || || || | || ||||| |||||||| ||||||| ||| || Sbjct 614963 AGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATAACATC 614904 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||||| || | ||||| ||||| Sbjct 614903 CAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACT 614869 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || ||||| || ||| ||| || || | || Sbjct 615964 AAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCCGATACCATTGACAAC 615905 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || |||||||| ||| || ||| |||||| | ||||| Sbjct 615904 GTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATCTTT 615845 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| ||||||| || |||||||| ||||||| ||| | || || |||||| Sbjct 615844 GCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATAACATTCAAAAGGAGTCT 615785 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||| || | ||||| ||||| Sbjct 615784 ACTCTGCATTTGGTTTTAAGACT 615762 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| |||||||| || |||||| |||||||| |||| Sbjct 614843 AAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCTGACACCATCGACAAC 614784 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| || ||||| ||| || ||| |||||||| ||||| Sbjct 614783 GTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAAAGACTAATCTTT 614724 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | || ||||| || || || | || || ||| | || || || ||| Sbjct 614723 GCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAACATTCAAAAGGAATCT 614664 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 || | ||| | ||||| ||||| Sbjct 614663 ACCTTACACTTGGTTTTAAGACT 614641 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| |||||||| || |||||| |||||||| |||| Sbjct 615736 AAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCTGACACCATCGACAAC 615677 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| || ||||| ||| || ||| |||||||| ||||| Sbjct 615676 GTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAAAGACTAATCTTT 615617 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | || ||||| || || || | || || ||| ||||||| || ||| Sbjct 615616 GCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAACATCCAGAAGGAATCT 615557 Query 206365 AC 206366 || Sbjct 615556 AC 615555 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||| | || || ||| |||||||| | Sbjct 512402 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCAT 512461 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||| || || ||||| || || ||| |||||| | Sbjct 512462 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 512521 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| ||||||||||| || || ||| ||||||||||| |||| || Sbjct 512522 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCCGATTACAACATCCAAAA 512581 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||| | ||| | ||| Sbjct 512582 GGAATCTACTTTGCACTTGGTTCTAAGA 512609 >seq25 Length=339617 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||||||| |||||| || |||| Sbjct 150065 AAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGATACTATCGATAAT 150006 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| | ||| ||||| || || ||||| ||| || ||| || ||| | || || Sbjct 150005 GTTAAATCTAAA-ATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAGAGATTGATTTT 149947 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| |||||||| || || ||| || | ||||||||| ||||||||||||| Sbjct 149946 TGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAAGAGTC 149887 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 |||||| ||| | ||||| ||||| Sbjct 149886 TACTCTGCACTTGGTTTTAAGACT 149863 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || ||||||||||| || ||| |||||||| | Sbjct 40983 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCAT 41042 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||| || || ||||| || || ||| |||||| | Sbjct 41043 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 41102 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||||| || ||||| ||||||||||| || || ||| | || |||||| |||| || Sbjct 41103 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 41162 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||| | ||| | ||| Sbjct 41163 GGAATCTACTTTGCACTTGGTTCTAAGA 41190 >seq17 Length=530849 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || || | || || ||| ||||||| Sbjct 311313 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCTGAC 311372 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || ||||| || || ||| ||| Sbjct 311373 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAA 311432 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||||||||| || || ||| |||| |||||| || Sbjct 311433 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAACATC 311492 Query 206353 CAGAAAGAGTCTAC 206366 || || || || || Sbjct 311493 CAAAAGGAATCCAC 311506 >seq3 Length=965618 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || || | ||||| ||| ||||||| Sbjct 656801 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCTGAC 656742 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || || || ||| ||| Sbjct 656741 ACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAACAA 656682 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||||||||| || || ||| |||| |||||| || Sbjct 656681 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAACATC 656622 Query 206353 CAGAAAGAGTCTAC 206366 || || || || || Sbjct 656621 CAAAAGGAATCCAC 656608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817468742620