Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 seq25 100 3e-16 seq3 91.5 1e-13 >seq12 Length=625618 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | ||||| ||| ||||||| | ||||| ||| | | Sbjct 615086 ATGCAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCC 615027 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || ||| ||| |||||||| ||||| || || || ||| Sbjct 615026 GATACCATCGACAACGTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACCAG 614967 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| || | | || |||||||| || |||| ||| | | | |||||| || Sbjct 614966 CAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATAAC 614907 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| || || || | ||||| || |||||| | ||||| || Sbjct 614906 ATCCAAAAGGAGTCTACTCTGCATTTGGTTTTAAGACTAAGAGGTGG 614860 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| |||| || ||| | ||||| | || || ||| || Sbjct 614858 ATGCAAATCTTTGTGAAAACTCTAACTGGTAAAACTATCACTTTAGAGGTGGAATCCTCT 614799 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||| ||| || || || ||||| || || || ||| Sbjct 614798 GACACCATCGACAACGTTAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 614739 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| || | | || || ||||| || |||| ||||| | || || || Sbjct 614738 CAAAGACTAATCTTTGCGGGTAAGCAACTAGAGGATGGTAGAACCTTATCTGACTATAAC 614679 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||| ||| | || || || |||||| | ||||| || Sbjct 614678 ATTCAAAAGGAATCTACCTTACACTTGGTTTTAAGACTAAGAGGTGG 614632 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| || || || || || || | ||||| | || |||||| || || || || Sbjct 512403 TTTGTCAAGACTTTGACTGGTAAGACCATCACTCTAGAGGTCGAATCCTCTGACACCATT 512462 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || || ||| ||| || || || ||||| || || || || |||||| | Sbjct 512463 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 512522 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361 || | | || || ||| | ||||||| ||||| |||| ||||||||| || |||| Sbjct 512523 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTC--CGATTACAACATCCAAA 512580 Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| || | || || || ||||||||||||| || Sbjct 512581 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGG 512620 >seq25 Length=339617 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||| | Sbjct 150080 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 150021 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||||||||| | || ||| |||||| || || || ||||| || || || || Sbjct 150020 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 149961 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || ||| | ||||| | ||||| | | |||||||| Sbjct 149960 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 149901 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 || || ||||| || || | || || || |||||| | ||||| ||| Sbjct 149900 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 149853 >seq3 Length=965618 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||| || || || || || || | || || | ||||| ||| | Sbjct 656808 CAAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATC 656749 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| || | || || || ||| || || |||||||| || || || Sbjct 656748 TTCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGA 656689 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGAT 25348 || |||||| | || | | || || ||| | ||||||| ||||| |||| ||| Sbjct 656688 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTC--CGAC 656631 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| ||||||||| | || || || ||||||||||||| || Sbjct 656630 TACAACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 656578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093175990400