Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 172 4e-38 seq15 165 6e-36 seq14 118 8e-22 >seq6 Length=912967 Score = 172 bits (190), Expect = 4e-38 Identities = 401/598 (67%), Gaps = 20/598 (3%) Strand=Plus/Minus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | || || ||| |||||||||| || |||||| ||||| | |||| | Sbjct 171548 TAGATTTGTTCTTTTCCCCATTAAATATCATGAAATTTGGCAAGCTTACAAGAGAGCAGA 171489 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815 || |||||||||||||| |||||| | ||||| | || || || | |||||| | Sbjct 171488 AGCATCATTTTGGACAGCTGAAGAAATCGATTTATCGAAGGATTTGGATGATTGGAAT-- 171431 Query 43816 ATTAAAACCAC--AAG---AAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCG 43870 | ||| | | ||| ||| | |||| || || || | ||||| ||||| || Sbjct 171430 AATAAGATGAGTGAAGGTGAAAGATATTTCATTTCAAGAGTCCTAGCGTTCTTTGCAGCA 171371 Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACC 43929 ||| || || || ||||| |||||||| || | | || || || ||| |||| Sbjct 171370 TCCGATGGTATTGTTAATGAGAATTTGGTGGAGAATTTCTCTGCT-GAGGTCCAAATACC 171312 Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 || || || || || ||||| || ||| || |||||||| ||||| |||| || Sbjct 171311 GGAGGCTAAGTGCTTCTACGGGTTCCAGATTATGATGGAAAATATCCATTCTGAAACTTA 171252 Query 43990 CAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGC 44049 || |||| ||||| |||| | |||| | || | | || |||||||| Sbjct 171251 TTCGCTATTGATTGATACCTACAGTAGAGATACCGAGGAAAGTGAATTTTTATTTAATGC 171192 Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTC 44109 || |||| | || | || || | || ||||| ||||| ||| ||||| || Sbjct 171191 AATTGAAAACATTCCACCAATCAAGGAAAAGGCAGAATGGGCAATTAGGTGGAT----TC 171136 Query 44110 AA-ATGATTCT------TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 || | ||| || | || ||| || | || || ||||| | |||||||| ||| Sbjct 171135 AAGACGATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCGCAGTGGAAGGTGTTT 171076 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 |||| || ||||| ||||| ||||| |||||||| ||||| ||| | ||||| || | Sbjct 171075 TCTTCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTAATGCCAGGTT 171016 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | || || || ||||| || || || | || ||||| || || ||||||||||| Sbjct 171015 TAACTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACACAGATTTTGCTTG 170958 >seq15 Length=608780 Score = 165 bits (182), Expect = 6e-36 Identities = 354/521 (68%), Gaps = 30/521 (6%) Strand=Plus/Plus Query 19354 TTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA--- 19410 || |||||||| || || ||| || || || || || || ||| || || |||| Sbjct 420907 TTACTTTATGGTCCTCCAGGTACCGGTAAGACTTTGATCGCTAGAAAAATTGGTAAGATG 420966 Query 19411 TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTA 19470 ||| | |||| ||||| || ||||| |||||||| ||||| |||| |||||| || Sbjct 420967 TTAAATGCAAAGGAACCT---AAGATTGTGAATGGTCCAGAAATTTTAAGTAAATACGTG 421023 Query 19471 GGTCAATCGGAAGAAAATGTACG--ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAAC 19528 || |||||||||||| | || || ||| | || || |||| ||| | | Sbjct 421024 GGGTCCTCGGAAGAAAATATTCGTAACCTTTTCAAG--GATGCAGAAGCCGAATATAG-- 421079 Query 19529 GTTTAGGGCGCAAAAGTTCT--TTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586 || || || || | | || ||||| || || || | ||||||||||| | | | Sbjct 421080 GTCTAAGGGTGAAGATTCCTCATTGCATATCATTATCTTTGATGAATTGGATTCTGTTTT 421139 Query 19587 TAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640 ||||||||||||||| || || | || || ||||| ||||||||||||| | Sbjct 421140 TAAGCAAAGAGGTTCGAGAGGTGATGGTACAGGCGTTGGTGACAATGTTGTCAATCAATT 421199 Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 || | || | || |||||| | ||| ||||||| ||| ||||||| || ||||| || Sbjct 421200 GCTAGCCAAGATGGATGGTGTTGATCAATTGAATAACATTCTAGTTATCGGTATGACCAA 421259 Query 19701 ---TAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGAT 19757 |||| || ||||| || | || |||||||| || ||| | || || | | | Sbjct 421260 CCGTAGA---GATTTAATTGATAATGCTTTATTACGTCCAGGTAGATTCGAGGTCCAAGT 421316 Query 19758 CGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAAC 19817 |||||| ||||||| |||||| || | || |||||||| | || || || || Sbjct 421317 GGAAATTCACTTACCAGATGAACAGGGTAGATTGCAAATTTTAGATATTCAGACCAAAAA 421376 Query 19818 CATGCGACAAAATAACCT--TTTAAATGACGATGTAGATCT 19856 ||| || |||||||| | || ||| | ||||| ||||| Sbjct 421377 GATGAGAGAAAATAACATGCTTGAAA--AGGATGTTGATCT 421415 >seq14 Length=600916 Score = 118 bits (130), Expect = 8e-22 Identities = 362/558 (65%), Gaps = 19/558 (3%) Strand=Plus/Minus Query 40749 TGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGG 40808 ||||| || |||||||||| | | |||||| ||||| || || || | |||||| Sbjct 444275 TGGTTCATTTCAGGTTGTACTGACGGTAAGAAGTTATCTGAGCAGGGCGTTAAAATTTGG 444216 Query 40809 AATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGT 40868 | | | | || | | ||| || || || ||||| || || || ||||||| Sbjct 444215 GAAGGCAATGGATCCAGAGAGTATCTGGATAAAATCGGATTGCACGACAGACGTGAAGGT 444156 Query 40869 GATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA-TGACACTAT 40927 || ||||||||||| || || || || | | |||||||||| || ||||| || || | Sbjct 444155 GACCTTGGTCCTGTCTACGGTTTCCAATGGAGACATTTTGGTGCCAAATACAGAACCTGT 444096 Query 40928 GTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAA 40987 | || |||||||| |||| | |||||||| || || || |||| ||||| Sbjct 444095 G-ACGACGATTATACTGGACAAGGGTTCGATCAATTGAAGGAGGTGATTGATA-AATTAA 444038 Query 40988 ATCCGATCCC-GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATT 41046 | | ||| || || | || || || | |||||||| || | ||| | | Sbjct 444037 AAAATAACCCATATGATCGGAGAATTATTATGAGTGCGTGGAATCCGCCAGACTTTCCAC 443978 Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTT---------------T 41091 | |||||||| ||||| ||||| | || | || ||||||||| Sbjct 443977 TAATGGCATTACCACCATGTCACGTATTTTCACAATTTTACGTTAACTTCCCCAAGGAGG 443918 Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151 |||| | || ||||||||| | ||||||| ||||| |||| ||||| | || || | Sbjct 443917 GCAAGCCTAAATTGTCATGTCTACTGTATCAGAGATCCTGTGATATGGGGTTGGGAGTTC 443858 Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211 | || ||||| || || || || | || | ||||||||||| || | || | Sbjct 443857 CATTCAACATTGCATCCTACGCACTTTTGACCAAGATGATTGCACATGTGTGCGATATGG 443798 Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271 ||||| ||||||| | || || | || |||| || || |||| |||| | || Sbjct 443797 AACCTAGTGAATTCATCCATACAATGGGTGATGCTCACATCTACAAGGATCATGTGGATG 443738 Query 41272 CGTTAACAGAACAACTGA 41289 | | | ||||||| ||| Sbjct 443737 CTCTGAAAGAACAATTGA 443720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454934321100