Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 seq15 98.7 1e-15 seq1 93.3 5e-14 >seq3 Length=965618 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAG-TCTGATTGACATGAGTGCTGATCGTGGTGCGT 55802 |||||||||||| ||| | || |||| | | ||||| ||| ||||||||| || Sbjct 324558 GACGGTGTGGGAAATTTCTCA-AAGACATGTTATTGATATGGCCGCTGATCGTTCCTTGT 324500 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||||| || || || || |||||||| |||| |||| || ||| || |||| Sbjct 324499 TCATCGATCAATCGCATTCCTTGAACATCCACATGCGCGCTCCTACAATGGGTAAATTGA 324440 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 |||||||| || || ||||||||||| |||||||||||||||||||| Sbjct 324439 CAAGTATGCACTTCTATGGTTGGAAGAAGGGTCTCAAGACGGGTATGTACTA 324388 >seq15 Length=608780 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| | ||||| ||||||| |||||||| || || || | || || Sbjct 278990 GGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACC 279049 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || || |||||||||||||||||||||| ||| || || ||||||||| Sbjct 279050 TGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGAT 279109 Query 74870 GCCTTCGACACACGCAAAGGCGAC 74893 ||||| || ||||| ||||| Sbjct 279110 ACCTTCAACTGCGGCAAATGCGAC 279133 >seq1 Length=1375271 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG-TCTGATTGACATGAGT 55786 |||| || | ||| |||||||||||| ||| | || |||| | | | |||||| | Sbjct 107578 TCAAAGATTTGTACAAGACGGTGTGGGAAATTTCTCA-AAGACATGTTCTAGACATGGCT 107636 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 |||||||||| || || ||| || || || || || |||| ||| |||| || Sbjct 107637 GCTGATCGTGCTGTGTTCATTGATCAATCTCATTCCTTGAATATCCACATGCGTGCCCCC 107696 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| || || | |||||||| ||||| ||||||||||| |||||||| ||| Sbjct 107697 ACAATGGGTAAATTAACAAGTATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACTGGT 107756 Query 55907 ATGTACTA 55914 |||||||| Sbjct 107757 ATGTACTA 107764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214495156000