Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq12 96.9 2e-15 seq25 87.8 1e-12 >seq12 Length=625618 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || ||||| ||||| || |||||| | || || ||| || Sbjct 615979 ATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCC 615920 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || |||| ||||| ||| || || ||||||||| |||| || | Sbjct 615919 GATACCATTGACAAC--GTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGACC 615862 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | ||||| |||||||| || ||| |||| |||| | | || |||||||| | Sbjct 615861 AACAAAGATTAATCTTTGCCGGTAAGCAACTGGAAGACGGTAGGACTTTATCCGATTATA 615802 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 |||| ||||| ||| ||| ||||||||||||| Sbjct 615801 ACATTCAAAAGGAGTCTACTCTGCATTTGGTTTT 615768 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || ||||| || || ||| || || | || || ||| || Sbjct 615086 ATGCAGATTTTCGTCAAGACTCTGACCGGTAAAACGATCACTCTGGAAGTGGAATCTTCC 615027 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || |||| ||||| ||| || || ||||||||| |||| || | Sbjct 615026 GATACCATCGACAAC--GTCAAGTCAAAGATTCAGGATAAAGAAGGTATTCCACCTGACC 614969 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| | |||| ||||| || |||||| | || || | | | || |||||||| | Sbjct 614968 AGCAAAGACTAATCTTTGCAGGTAAACAACTAGAGGATGGTAGGACTTTATCCGATTATA 614909 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 |||||||||| ||| ||| ||||||||||||| Sbjct 614908 ACATCCAAAAGGAGTCTACTCTGCATTTGGTTTT 614875 >seq25 Length=339617 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||||||||| | ||||| ||| || || | || || ||| | Sbjct 150080 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 150021 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| ||||| |||||| |||| || | Sbjct 150020 GATACTATCGATAAT--GTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACC 149963 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || | || |||||||| || || |||||||| |||| | | |||| ||||||| Sbjct 149962 AACAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACA 149903 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||||| |||||| ||| |||| |||||||| Sbjct 149902 ACATCCAGAAAGAGTCTACTCTGCACTTGGTTTT 149869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861445843940