Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq12 168 2e-36 seq25 161 2e-34 seq17 159 8e-34 seq3 152 1e-31 seq4 113 1e-19 >seq12 Length=625618 Score = 168 bits (186), Expect = 2e-36 Identities = 175/227 (77%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| | ||| || || ||||||||||| ||||| | | || || || Sbjct 512609 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACC 512550 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 512549 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 512490 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| |||||| || ||||| || |||||||||||| ||| ||||| |||||||| Sbjct 512489 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGAT 512430 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT-TTATGGTTA 211124 ||||| || || | |||||| |||| | ||||||| ||| |||| Sbjct 512429 GGTCTTACCAGTCAAAGTCTTGACAA--AACTGCATTCCTATAGTTA 512385 Score = 163 bits (180), Expect = 7e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | || ||||| ||||| ||||||||||||||||| | | ||||| Sbjct 614869 AGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTCCTA 614928 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || || || || ||||| ||||| || | ||| |||||||| |||| ||||| Sbjct 614929 CCATCCTCTAGTTGTTTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCT 614988 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| |||||| || ||||| |||||||| || || ||| || || |||||| Sbjct 614989 TTATCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAAGATTCCACTTCCAGAGTG 615048 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || |||||||| || || | |||||| Sbjct 615049 ATCGTTTTACCGGTCAGAGTCTTGACGAAAATCTGCAT 615086 Score = 156 bits (172), Expect = 1e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | || ||||| ||||| ||||| ||||||||||| | | ||||| Sbjct 615762 AGTCTTAAAACCAAATGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTA 615821 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || |||||||| ||||| || || ||||| | | ||||||||| ||||||| ||||| Sbjct 615822 CCGTCTTCCAGTTGCTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCT 615881 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| |||||| || ||||| || ||||| || || ||||||||| | || Sbjct 615882 TTATCCTGAATCTTTGACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTA 615941 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || ||||| || || |||||||| || || | |||||| |||| Sbjct 615942 ATAGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCATAATATG 615985 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | ||| | || || || ||||| |||||||| || | | ||| || Sbjct 614641 AGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTA 614700 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || || ||||| || || ||||| || | ||| |||||||| |||| |||||| Sbjct 614701 CCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCC 614760 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || |||||| || ||||| ||||||||||||||| ||| ||||| | |||| Sbjct 614761 TTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTG 614820 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || ||||| || ||||| | ||||| Sbjct 614821 ATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || ||||||||||| || | | ||| || ||||| || || ||||| || Sbjct 615555 GTAGATTCCTTCTGGATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCC 615614 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| || | ||| |||||||| |||| ||||||||||| || |||||| || Sbjct 615615 GCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTA 615674 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||||||||||||| ||| ||||| | |||||| || || || || ||||| Sbjct 615675 ACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTT 615734 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 615735 TTCACAAAGATTTGCAT 615751 >seq25 Length=339617 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||| | ||| || || ||||||||||| || || | | || || || Sbjct 41190 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 41131 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || |||||||| | | |||||||||||| || | |||||||| Sbjct 41130 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 41071 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| |||||| || ||||| || |||||||||||| ||| ||||| | |||||| Sbjct 41070 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 41011 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 41010 GGTCTTACCAGTCAAAGTCTTGACAAA 40984 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || ||||| ||||| || || || |||||||| ||||| | ||||| || || Sbjct 150093 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 150152 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || || ||||| || || ||||| || | ||||||||| ||||||| || ||||| Sbjct 150153 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 150212 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||| ||||||||||| || || || || | |||||| Sbjct 150213 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 150272 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || |||||||| || || | ||||| Sbjct 150273 AGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||||||||| || || |||||||| ||||| | | || || || Sbjct 150321 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 150380 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || || || | | |||||||| ||||||| ||||| || Sbjct 150381 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCGTT 150440 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||||||| || ||||| |||||||| ||||| ||||||||| | || || Sbjct 150441 GTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 150500 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | |||||| Sbjct 150501 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||||| || | ||| ||||| |||||||| |||||||| ||||| | || || || Sbjct 149863 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 149922 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| ||||| || || | | |||||||||||||||| |||||| Sbjct 149923 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 149982 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| || || ||| || || ||||| || ||||| ||| || || | |||| Sbjct 149983 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 150042 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | || || ||||| | ||||| Sbjct 150043 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 >seq17 Length=530849 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | ||| | ||||| || ||||||||||| || || | | ||| || || Sbjct 311525 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 311466 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 311465 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 311406 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| || || || ||||| |||||||| ||||||||| || || || Sbjct 311405 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 311346 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| ||||| | |||||| Sbjct 311345 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 311310 >seq3 Length=965618 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | ||| | ||||| || ||||||||||| || || | | ||| || || Sbjct 656589 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 656648 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| || | || ||||| Sbjct 656649 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 656708 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| || || || || || |||||||| |||||| || || || || Sbjct 656709 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 656768 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| | |||||| ||||| | |||||| || Sbjct 656769 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 >seq4 Length=944690 Score = 113 bits (124), Expect = 1e-19 Identities = 363/557 (65%), Gaps = 10/557 (2%) Strand=Plus/Minus Query 139431 AATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTC 139490 |||||| || | ||| ||||||| || || |||||||| || |||| ||| | || || Sbjct 476792 AATGTTAACAGATGAATATGGTACCGCATCTAACATTAAATCAAGAGTTAACCGTCTATC 476733 Query 139491 TGTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAA 139550 ||| | || || ||| || |||||| ||||||||| | || ||| Sbjct 476732 CGTTTTATCTGCCATTACTTCTACTCAACAAAAGCTAAAACTTTACACTAAAGTTCCACC 476673 Query 139551 GAACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCCCGAAGGCAAGGAGAAAAAGGT 139610 || || | || || | | | || | |||| | ||||| ||||| || || || Sbjct 476672 AAATGGTTTAGTTATCTATTGTGGTGATATTATCAATGAAGAAGGTAAGGAAAAGAAAGT 476613 Query 139611 TGCATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTT-TACGCATGCGACAGTG 139669 | ||||||| || ||||||| ||||||| | | | || || || || | Sbjct 476612 TACATTCGATATCGAACCTTATAAGCCAATCAAC-ACATCCTTATATTTGTGTGATAACA 476554 Query 139670 TTTTCCATACGGATTGTCTGAAAGATCTGTTGTA---TGATGACCAATCTTATGGTTTTA 139726 |||||||| || ||| ||| ||| || | ||||||| ||| ||||| | Sbjct 476553 AATTCCATACTGAAGTTCTATCAGAACTGCTGGAAGCTGATGACAAATTC---GGTTTCA 476497 Query 139727 TTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAACAA 139786 || | ||||||| || || |||| | ||||| || | || ||||| Sbjct 476496 TTGTTATGGATGGTCAAGGATCCTTGTTTGGTTCGCTTTCTGGTAACACCAGAACCGTTT 476437 Query 139787 T-CTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTG 139845 | | | | ||| || ||| | |||||||| ||||| ||||| |||||||||||| || Sbjct 476436 TGCACAAATTTTCA-GTTGATTTACCAAAGAAACACGGTAGAGGTGGACAATCTGCTATG 476378 Query 139846 CGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAAC 139905 ||||| | | | | || | |||||||| || ||||| |||||||||| ||||| Sbjct 476377 CGTTTCGCACGTTTAAGAGAAGAAAAGAGACATAACTATGTGAGAAAAGTGGCAGAAGTT 476318 Query 139906 GCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGT 139965 || |||| ||| |||| || | ||| | |||| ||| | ||||||| ||| Sbjct 476317 GCTGTACAAAATTTCATCACTAACGATAAGATTAATGTTAAAGGTTTGATTTTGGCTGGT 476258 Query 139966 TCCGCAGAGTTCAAGAC 139982 || ||||| |||||||| Sbjct 476257 TCAGCAGATTTCAAGAC 476241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148732640300