Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq25 168 2e-36 seq12 165 2e-35 seq17 159 8e-34 seq3 152 1e-31 seq8 96.9 8e-15 seq2 95.1 3e-14 seq39 87.8 4e-12 >seq25 Length=339617 Score = 168 bits (186), Expect = 2e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||||||||| || |||| |||||||| | ||||||||| || Sbjct 150321 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 150380 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| || ||||| ||||| || || | || |||||||| || ||||||||||| || Sbjct 150381 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCGTT 150440 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||||||| ||| || |||||||| || || | ||| || || || || || Sbjct 150441 GTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 150500 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| || | ||| | ||||| Sbjct 150501 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 150536 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | ||| ||||| ||||||| ||||| || | ||| ||||| || Sbjct 41190 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 41131 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||||||||| | || ||||||||| || || ||||||||||| Sbjct 41130 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 41071 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || |||||| ||| || || |||||||| |||| ||| || || || ||||| Sbjct 41070 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 41011 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || |||||||| || Sbjct 41010 GGTCTTACCAGTCAAAGTCTT 40990 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || ||||| ||||| ||||| || |||| |||||||| | || ||||| || Sbjct 150093 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 150152 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || || ||||| ||||| ||||| |||| ||||||||| || |||||||| ||||| Sbjct 150153 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 150212 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 || || |||||| ||| || ||||||||||| || | || || ||||| ||||| Sbjct 150213 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 150272 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || | ||| || | ||| | |||||| Sbjct 150273 AGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 150308 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| | || | ||| ||||| || ||||| |||| |||||||| | || |||||| Sbjct 149863 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 149922 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||| | ||||| || || || || | || |||||||| || |||||||||||| Sbjct 149923 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 149982 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || || || || ||| ||||| || || || | |||||| || || ||| Sbjct 149983 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 150042 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| ||||| | || | |||||| Sbjct 150043 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 150080 >seq12 Length=625618 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | ||| ||||| ||||||| |||||||||| ||| ||||| || Sbjct 512609 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAATCGGACAACGTTCTACC 512550 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 512549 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 512490 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || |||||| ||| || || |||||||| |||| ||| || |||| ||||| Sbjct 512489 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCTAGAGTGAT 512430 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || |||||||| || Sbjct 512429 GGTCTTACCAGTCAAAGTCTT 512409 Score = 154 bits (170), Expect = 4e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| | || | ||| | || ||||| ||||| | || || || | || ||||| Sbjct 614641 AGTCTTAAAACCAAGTGTAAGGTAGATTCCTTTTGAATGTTATAGTCAGATAAGGTTCTA 614700 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| ||||| ||||| || || ||||| |||| ||| ||||| || |||||||||||| Sbjct 614701 CCATCCTCTAGTTGCTTACCCGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCC 614760 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| |||||| ||| || ||||||||||| |||| |||||| ||||| ||| Sbjct 614761 TTGTCTTGAATCTTTGACTTAACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTG 614820 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | |||||| | || | |||||| Sbjct 614821 ATAGTTTTACCAGTTAGAGTTTTCACAAAGATTTGCAT 614858 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| || |||| || || || | || ||||| ||||| ||||| ||||| || Sbjct 615555 GTAGATTCCTTCTGGATGTTATAGTCAGATAAGGTTCTACCATCCTCTAGTTGCTTACCC 615614 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || ||||| |||| ||| ||||| || |||||||||||||||||||| |||||| ||| Sbjct 615615 GCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTA 615674 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||||||||| |||| |||||| ||||| ||||| || || || || | |||| Sbjct 615675 ACGTTGTCGATGGTGTCAGAGGATTCCACCTCTAAAGTGATAGTTTTACCAGTTAGAGTT 615734 Query 225697 TTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 615735 TTCACAAAGATTTGCAT 615751 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| || || ||||||| || ||||||| ||||| || ||||| ||||| || Sbjct 614884 TGCAGAGTAGACTCCTTTTGGATGTTATAATCGGATAAAGTCCTACCATCCTCTAGTTGT 614943 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| |||| ||| ||||| || ||||||||||| || || || |||||| Sbjct 614944 TTACCTGCAAAGATTAGTCTTTGCTGGTCAGGTGGAATACCTTCTTTATCCTGAATCTTT 615003 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || |||||||| || || | |||||| || | |||||||| || || ||| Sbjct 615004 GACTTGACGTTGTCGATGGTATCGGAAGATTCCACTTCCAGAGTGATCGTTTTACCGGTC 615063 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | ||| || | ||| | ||||| Sbjct 615064 AGAGTCTTGACGAAAATCTGCAT 615086 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| || || ||||| | || ||||||| ||||| || || ||||| || ||| Sbjct 615777 TGCAGAGTAGACTCCTTTTGAATGTTATAATCGGATAAAGTCCTACCGTCTTCCAGTTGC 615836 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| | || ||||||||| || ||||||||||| || || || |||||| Sbjct 615837 TTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCCTGAATCTTT 615896 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || ||||| || || | ||| || || || || || ||||| || || Sbjct 615897 GACTTGACGTTGTCAATGGTATCGGAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTT 615956 Query 225691 AAAGTTTTTATGAACACTTGCATTTTATG 225719 | ||| || | ||| | ||||| |||| Sbjct 615957 AGAGTCTTAACGAAAATCTGCATAATATG 615985 >seq17 Length=530849 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | |||||||| ||||||| ||||| |||| ||| ||||| || Sbjct 311525 TCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 311466 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 311465 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 311406 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| ||| ||| ||||| ||||| || | ||| || |||| || || Sbjct 311405 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTAAT 311346 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||||||||| || Sbjct 311345 GGTCTTACCCGTCAAAGTCTT 311325 >seq3 Length=965618 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | |||||||| ||||||| ||||| |||| ||| ||||| || Sbjct 656589 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 656648 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| ||||| Sbjct 656649 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 656708 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| ||| ||| || || ||||| || | ||| || |||| || || Sbjct 656709 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 656768 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||||| || | || | ||||| || Sbjct 656769 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 656807 >seq8 Length=833532 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || ||||| || || || |||||||| || | |||||| Sbjct 259939 GAAAATTTGACCATCGGTAATGGAAATAACGTTAGTTGGAATATAAGCGGAGATATCACC 259880 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 |||| ||||||| || || ||||||||||| || ||| ||||| Sbjct 259879 ACCTTGGGTTTCGATGACTGGCAAGGCTGTTAGGGAACCAGCACCA 259834 >seq2 Length=1098330 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| |||||||| || || || |||||||| || | |||||| Sbjct 37007 GAAAATTTGACCATCAGTAATGGAGATAACGTTAGTTGGAATATAAGCGGAGATATCACC 36948 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| ||||| | ||| || || |||||||| || || |||| Sbjct 36947 ACCTTGAGTTTCAATAACCGGCAAAGCTGTTAGAGAACCTGCACC 36903 >seq39 Length=33781 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503 |||||||| |||||| | ||| |||||| |||||| | | || | ||||| Sbjct 29584 TTATATTTTGTATTTGCTTTATTTAGTGGTATGGCAGGTACAGCAATGTCAGTAATTATT 29525 Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTACAA 7562 || | |||||| | || || ||| ||||| |||| || |||||||| ||| | | ||| Sbjct 29524 AGAATGGAATTATCAGCACCAGGTGCTCAA-TATTTAGCTGGTAATAATCAATTATTCAA 29466 Query 7563 CGTTATTAT-TACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621 || |||| ||| | ||||| || | |||||||||||||| || ||||| | |||| Sbjct 29465 TGT-ATTAGCTACTGGTCATGCTGTTTTAATGATTTTCTTTTTAGTAATGCCAGCAATGA 29407 Query 7622 TAGGCGGTTTCGGAAA 7637 | || ||||| || || Sbjct 29406 TTGGAGGTTTTGGTAA 29391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527838552680